Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004376.2 Cucumis melo HOM05D006821 ORTHO05D008740 2.1e-172 609.0 313 100.0
CsaV3_2G004180 Cucumis sativus L. HOM05D006821 ORTHO05D008740 3.7e-153 545.0 327 87.5
ClCG02G016590 Citrullus lanatus HOM05D006821 ORTHO05D008740 4.3e-138 495.0 327 81.0
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 1.4e-125 453.4 326 75.8
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 1.6e-84 317.0 327 54.1
CANSAT54G2350 Cannabis sativa HOM05D006821 ORTHO05D008740 2.1e-84 316.6 326 53.1
RcHm_v2.0_Chr3g0451171 Rosa chinensis HOM05D006821 ORTHO05D008740 1.5e-82 310.5 327 53.2
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 3.7e-81 305.8 330 51.8
Prupe.6G342700 Prunus persica HOM05D006821 ORTHO05D008740 8.3e-81 304.7 327 52.9
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 2.4e-80 303.1 328 51.5
MD04G1224000 Malus domestica HOM05D006821 ORTHO05D008740 3.2e-80 302.8 327 52.6
Haze_04355 Corylus avellana HOM05D006821 ORTHO05D008740 5.4e-80 302.0 327 50.8
MD12G1240800 Malus domestica HOM05D006821 ORTHO05D008740 7.0e-80 301.6 327 52.9
FAN05G1836 Fragaria x ananassa HOM05D006821 ORTHO05D008740 9.2e-80 301.2 327 51.1
FvH4_6g02990 Fragaria vesca HOM05D006821 ORTHO05D008740 1.2e-79 300.8 327 51.1
FAN05G4221 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.6e-79 300.4 327 51.1
FAN09G4578 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.6e-79 300.4 327 51.4
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 1.6e-79 300.4 327 50.2
CSS0006427 Camellia sinensis var. sinensis HOM05D006821 ORTHO05D008740 3.5e-79 299.3 327 51.7
FAN02G2705 Fragaria x ananassa HOM05D006821 ORTHO05D008740 4.6e-79 298.9 327 51.1
TAR633G1083 Trochodendron aralioides HOM05D006821 ORTHO05D008740 4.6e-79 298.9 327 52.6
CiPaw.07G067000 Carya illinoinensis HOM05D006821 ORTHO05D008740 1.0e-78 297.7 326 50.9
Actinidia18357 Actinidia chinensis HOM05D006821 ORTHO05D008740 1.3e-78 297.4 327 51.1
FAN14G2672 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.3e-78 297.4 327 50.8
Cfa006429 Carpinus fangiana HOM05D006821 ORTHO05D008740 2.3e-78 296.6 328 49.4
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 6.6e-78 295.0 330 51.8
TAR362G0286 Trochodendron aralioides HOM05D006821 ORTHO05D008740 6.6e-78 295.0 327 52.0
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 1.1e-77 294.3 330 53.0
TWI56G0757 Tripterygium wilfordii HOM05D006821 ORTHO05D008740 1.5e-77 293.9 325 52.0
COL.COLO4_15343 Corchorus olitorius HOM05D006821 ORTHO05D008740 4.3e-77 292.4 330 50.6
Ciclev10001807m.g Citrus clementina HOM05D006821 ORTHO05D008740 7.3e-77 291.6 331 51.1
Sc20g0000300 Simmondsia chinensis HOM05D006821 ORTHO05D008740 1.6e-76 290.4 328 50.3
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 6.2e-76 288.5 335 51.0
Atru.chr2.810 Acer truncatum HOM05D006821 ORTHO05D008740 1.1e-75 287.7 332 52.1
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 1.1e-75 287.7 327 51.1
Glyma.19G244500 Glycine max HOM05D006821 ORTHO05D008740 1.1e-75 287.7 327 50.5
Lj1g0025723 Lotus japonicus HOM05D006821 ORTHO05D008740 4.0e-75 285.8 327 49.5
Ca_09420_v3 Cicer arietinum L. HOM05D006821 ORTHO05D008740 6.8e-75 285.0 330 49.7
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 8.9e-75 284.6 331 48.9
PGSC0003DMG400019432 Solanum tuberosum HOM05D006821 ORTHO05D008740 1.2e-74 284.3 329 48.6
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 2.0e-74 283.5 331 48.3
Hma1.2p1_0195F.1_g084560 Hydrangea macrophylla HOM05D006821 ORTHO05D008740 2.0e-74 283.5 332 51.5
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 3.4e-74 282.7 331 48.0
CAN.G134.100 Capsicum annuum HOM05D006821 ORTHO05D008740 7.5e-74 281.6 329 48.0
Medtr7g115070 Medicago truncatula HOM05D006821 ORTHO05D008740 7.5e-74 281.6 334 48.8
Nitab4.5_0012228g0010 Nicotiana tabacum HOM05D006821 ORTHO05D008740 1.3e-73 280.8 328 48.2
arahy.Tifrunner.gnm1.ann1.7SV4PL Arachis hypogaea HOM05D006821 ORTHO05D008740 2.2e-73 280.0 329 47.4
QL03p025768 Quercus lobata HOM05D006821 ORTHO05D008740 4.9e-73 278.9 385 44.4
Dinv10030 Davidia involucrata HOM05D006821 ORTHO05D008740 2.4e-72 276.6 316 51.9
Sabra05G0046500 Salix brachista HOM05D006821 ORTHO05D008740 3.2e-72 276.2 383 47.3
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 9.2e-72 274.6 327 51.4
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 1.6e-71 273.9 329 47.4
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 2.1e-71 273.5 329 47.4
Cc02_g30600 Coffea canephora HOM05D006821 ORTHO05D008740 4.6e-71 272.3 332 48.2
Oeu038441.1 Olea europaea HOM05D006821 ORTHO05D008740 7.8e-71 271.6 329 48.6
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 7.8e-71 271.6 331 47.4
Hund22116 Selenicereus undatus HOM05D006821 ORTHO05D008740 1.7e-70 270.4 328 47.0
MBI11_g26138_MAGBIO Magnolia biondii HOM05D006821 ORTHO05D008740 1.1e-69 267.7 329 49.5
AUR62004944 Chenopodium quinoa HOM05D006821 ORTHO05D008740 1.5e-69 267.3 328 46.3
AUR62001014 Chenopodium quinoa HOM05D006821 ORTHO05D008740 9.5e-69 264.6 328 46.6
Nitab4.5_0001592g0080 Nicotiana tabacum HOM05D006821 ORTHO05D008740 4.7e-68 262.3 346 44.2
THA.LOC104821676 Tarenaya hassleriana HOM05D006821 ORTHO05D008740 6.2e-68 261.9 325 46.8
GSVIVG01021794001 Vitis vinifera HOM05D006821 ORTHO05D008740 6.2e-68 261.9 325 47.4
Psat2g125040 Pisum sativum HOM05D006821 ORTHO05D008740 1.4e-67 260.8 327 48.6
PGR004G1103 Punica granatum HOM05D006821 ORTHO05D008740 1.4e-67 260.8 329 45.9
Phvul.006G101500 Phaseolus vulgaris HOM05D006821 ORTHO05D008740 1.8e-67 260.4 328 46.0
Lalb_Chr04g0262251 Lupinus albus HOM05D006821 ORTHO05D008740 6.8e-67 258.5 328 44.2
Lj7A490T61 Lonicera japonica HOM05D006821 ORTHO05D008740 5.8e-66 255.4 386 41.2
VMungo0540G1649 Vigna mungo HOM05D006821 ORTHO05D008740 5.8e-66 255.4 330 45.8
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 3.7e-65 252.7 328 45.4
PSO461G0046 Papaver somniferum HOM05D006821 ORTHO05D008740 3.7e-65 252.7 328 45.1
DCAR_029732 Daucus carota HOM05D006821 ORTHO05D008740 8.3e-65 251.5 328 47.0
Migut.N01911 Erythranthe guttata HOM05D006821 ORTHO05D008740 8.3e-65 251.5 329 45.9
Aa31LG11G8550 Aethionema arabicum HOM05D006821 ORTHO05D008740 1.1e-64 251.1 328 45.4
PSO210G3560 Papaver somniferum HOM05D006821 ORTHO05D008740 1.9e-64 250.4 330 44.8
PSO210G3856 Papaver somniferum HOM05D006821 ORTHO05D008740 1.9e-64 250.4 330 44.8
SalBow4G1195 Salvia bowleyana HOM05D006821 ORTHO05D008740 7.1e-64 248.4 330 45.5
SalBow4G2420 Salvia bowleyana HOM05D006821 ORTHO05D008740 7.1e-64 248.4 330 45.5
ATR0606G003 Amborella trichopoda HOM05D006821 ORTHO05D008740 2.1e-63 246.9 333 44.1
Thhalv10004570m.g Eutrema salsugineum HOM05D006821 ORTHO05D008740 2.7e-63 246.5 327 44.0
BcaB04g19632 Brassica carinata HOM05D006821 ORTHO05D008740 1.7e-62 243.8 327 42.8
Sp2g20040 Schrenkiella parvula HOM05D006821 ORTHO05D008740 6.6e-62 241.9 326 42.6
BraA09t36137Z Brassica rapa HOM05D006821 ORTHO05D008740 1.9e-61 240.4 328 42.7
A09p04980 Brassica napus HOM05D006821 ORTHO05D008740 9.5e-61 238.0 328 42.7
BolC9t53466H Brassica oleracea HOM05D006821 ORTHO05D008740 1.6e-60 237.3 327 42.5
Cpa.g.sc117.86 Carica papaya HOM05D006821 ORTHO05D008740 1.6e-60 237.3 307 44.6
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 2.1e-60 236.9 327 42.2
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 2.1e-60 236.9 327 42.2
AT5G28830 Arabidopsis thaliana HOM05D006821 ORTHO05D008740 1.2e-58 231.1 320 42.8
Carub.0006s2610 Capsella rubella HOM05D006821 ORTHO05D008740 1.5e-58 230.7 328 41.8
CARHR185340 Cardamine hirsuta HOM05D006821 ORTHO05D008740 7.6e-58 228.4 328 42.7
EL10Ac4g09134 Beta vulgaris HOM05D006821 ORTHO05D008740 2.9e-57 226.5 406 37.2
TPR.G6944 Trifolium pratense HOM05D006821 ORTHO05D008740 3.8e-57 226.1 255 50.2
AL6G40810 Arabidopsis lyrata HOM05D006821 ORTHO05D008740 8.4e-57 224.9 322 41.6
SEGI_00561 Sequoiadendron giganteum HOM05D006821 ORTHO05D008740 4.2e-56 222.6 339 41.6
HPP92_024348 Vanilla planifolia HOM05D006821 ORTHO05D008740 2.1e-55 220.3 330 40.6
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 1.5e-50 204.1 330 37.9
CDE04G3363 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 5.8e-50 202.2 330 37.6
Dinv04728 Davidia involucrata HOM05D006821 ORTHO05D008740 5.8e-50 202.2 214 54.7
PSO210G3711 Papaver somniferum HOM05D006821 ORTHO05D008740 4.6e-47 192.6 225 48.9
Nn1g02511 Nelumbo nucifera HOM05D006821 ORTHO05D008740 1.1e-43 181.4 224 48.2
Pp3c20_9750 Physcomitrium patens HOM05D006821 ORTHO05D008740 2.4e-35 153.7 339 31.3
Mapoly0083s0056 Marchantia polymorpha HOM05D006821 ORTHO05D008740 5.5e-32 142.5 341 29.9
Ah.07g201960 Amaranthus hybridus HOM05D006821 ORTHO05D008740 1.8e-30 137.5 327 30.6
SMO259G0008 Selaginella moellendorffii HOM05D006821 ORTHO05D008740 6.7e-22 109.0 237 30.8
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 4.3e-21 106.3 353 28.6
CBR_g10979 Chara braunii HOM05D006821 ORTHO05D008740 1.0e-17 95.1 257 24.9
MELO3C028972.2 Cucumis melo HOM05D006821 ORTHO05D034973 2.0e-13 80.9 58 69.0
TPR.G24580 Trifolium pratense HOM05D006821 ORTHO05D008740 1.5e-10 71.2 102 43.1
AagrBONN_evm.TU.Sc2ySwM_228.4145 Anthoceros agrestis HOM05D006821 ORTHO05D008740 2.6e-10 70.5 147 32.7
CARHR032970 Cardamine hirsuta HOM05D006821 ORTHO05D008740 3.8e-09 66.6 69 46.4
SMO169G0202 Selaginella moellendorffii HOM05D004759 ORTHO05D005722 2.1e-07 60.8 335 24.2
Aa31LG9G3980 Aethionema arabicum HOM05D006821 ORTHO05D059654 2.3e-06 57.4 100 42.0


User provided reference genes

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