Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 0.0e+00 1857.0 935 100.0
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 0.0e+00 1649.0 961 87.9
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 0.0e+00 1575.8 947 84.9
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 0.0e+00 1241.5 967 69.8
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 3.2e-152 543.5 1083 37.9
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 8.9e-147 525.4 1078 39.0
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 1.7e-142 511.1 1087 37.5
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.9e-142 510.0 994 39.9
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 4.3e-141 506.5 1068 38.6
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 5.6e-141 506.1 1066 38.8
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 9.6e-141 505.4 999 39.5
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 1.4e-136 491.5 1074 35.7
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.9e-136 491.1 1028 38.3
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-135 488.0 1028 38.2
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.3e-133 480.3 1032 37.8
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.1e-131 475.3 893 39.9
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.2e-127 461.8 1047 36.3
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 3.1e-123 447.2 1003 35.4
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.1e-120 438.7 998 36.7
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 1.9e-120 438.0 1004 35.5
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 7.1e-120 436.0 1056 34.0
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 8.7e-118 429.1 1008 35.4
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 8.2e-116 422.5 1006 33.5
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.3e-113 415.2 964 35.2
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.2e-113 414.5 1027 33.6
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 2.9e-113 414.1 1046 33.3
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 6.5e-113 412.9 1038 33.9
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.4e-112 411.8 985 35.2
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 7.2e-112 409.5 1034 33.3
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 7.9e-111 406.0 1052 32.5
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.3e-110 404.4 978 33.9
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 2.3e-110 404.4 998 34.6
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 5.1e-110 403.3 1003 33.8
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 5.1e-110 403.3 1048 32.9
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 5.7e-109 399.8 1031 32.7
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.2e-108 397.9 1003 33.5
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.8e-108 397.5 1016 33.2
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 3.4e-106 390.6 974 33.7
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 7.2e-104 382.9 1006 33.7
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 2.1e-103 381.3 1007 33.2
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 6.1e-103 379.8 994 33.5
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 2.0e-101 374.8 1001 32.8
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 2.6e-101 374.4 1047 32.2
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 2.6e-101 374.4 1036 32.4
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 9.1e-99 365.9 573 42.2
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.2e-98 365.5 1003 31.5
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.0e-97 362.5 994 32.5
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 8.5e-97 359.4 1003 31.6
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.5e-96 357.8 1007 32.8
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 3.6e-95 354.0 1111 32.0
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 4.7e-95 353.6 1137 31.1
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 3.3e-93 347.4 1078 30.5
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 9.7e-93 345.9 1069 30.3
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.7e-92 345.1 1111 31.1
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 8.2e-92 342.8 1126 31.1
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 3.1e-91 340.9 1066 30.0
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 1.7e-89 335.1 1134 30.9
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 5.0e-89 333.6 1006 30.9
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.1e-88 332.4 1005 31.2
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 7.2e-88 329.7 760 34.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 2.3e-86 324.7 1073 29.1
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 2.0e-85 321.6 954 32.5
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.0e-85 321.6 1033 29.3
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 4.4e-85 320.5 987 30.9
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.3e-84 318.9 944 31.0
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 2.8e-84 317.8 967 31.1
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 6.3e-84 316.6 981 30.6
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 1.1e-83 315.8 1197 27.9
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 2.4e-83 314.7 983 30.3
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.6e-82 312.0 966 30.3
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 2.7e-82 311.2 997 31.2
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 5.9e-82 310.1 648 34.4
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.0e-81 309.3 1030 29.6
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 4.7e-79 300.4 988 29.1
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 2.3e-78 298.1 995 29.9
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.3e-76 292.4 993 30.0
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 1.1e-75 289.3 1008 29.3
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 1.4e-75 288.9 1006 30.0
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 3.1e-75 287.7 651 33.0
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 2.5e-72 278.1 997 28.8
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 4.2e-72 277.3 965 29.0
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 5.5e-72 276.9 968 28.7
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.1e-71 275.0 579 34.5
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 4.7e-71 273.9 981 28.6
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 6.1e-71 273.5 1034 28.8
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.8e-70 271.9 967 29.1
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.0e-69 268.5 542 33.9
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 4.4e-69 267.3 964 30.1
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 4.9e-68 263.8 718 30.4
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 8.3e-68 263.1 958 29.0
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 4.1e-67 260.8 512 34.8
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 7.0e-67 260.0 490 36.1
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 9.2e-67 259.6 976 28.7
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 5.9e-66 256.9 982 28.4
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.8e-62 245.4 852 29.9
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 5.7e-61 240.4 364 39.0
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 9.2e-59 233.0 430 35.1
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 2.6e-53 214.9 368 36.7
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.7e-49 202.2 514 31.3
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.5e-48 198.4 362 34.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 7.3e-48 196.8 183 50.3
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 2.9e-44 184.9 496 29.6
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 1.9e-40 172.2 713 30.0
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 5.6e-40 170.6 177 48.6
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 5.2e-30 137.5 260 32.7
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 5.2e-30 137.5 200 38.5
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 6.9e-30 137.1 218 37.6
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 8.4e-28 130.2 254 30.3
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.0e-26 124.0 321 29.9
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.2e-21 109.8 201 38.3
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 4.5e-21 107.8 311 33.1
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 4.9e-20 104.4 798 24.1
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 2.3e-17 95.5 189 33.3
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.0e-17 95.1 298 27.9
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.4e-14 86.3 70 55.7
CiPaw.08G165600 Carya illinoinensis HOM05D006048 ORTHO05D007642 4.5e-13 81.3 479 25.7
MELO3C031824.2 Cucumis melo HOM05D057089 ORTHO05D034916 5.5e-11 74.3 39 87.2
Lj9A29G6 Lonicera japonica HOM05D006048 ORTHO05D007642 3.7e-07 61.6 107 39.3
Atru.chr2.430 Acer truncatum HOM05D006048 ORTHO05D007642 6.2e-07 60.8 135 33.3
Atru.chr2.431 Acer truncatum HOM05D006048 ORTHO05D007642 1.8e-06 59.3 165 33.9


User provided reference genes

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