Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 4.8e-135 484.6 258 100.0
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 1.4e-86 323.6 180 91.7
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 2.4e-65 253.1 169 79.9
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 7.9e-53 211.5 179 66.5
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 9.1e-33 144.8 136 61.0
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 4.1e-17 92.8 144 43.1
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 5.9e-16 89.0 115 47.8
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 3.8e-15 86.3 127 42.5
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 1.2e-13 81.3 127 42.5
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 4.7e-13 79.3 144 37.5
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 1.4e-12 77.8 138 39.1
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 4.0e-12 76.3 123 43.9
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 4.0e-12 76.3 129 42.6
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 8.8e-12 75.1 136 41.2
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 2.0e-11 73.9 129 41.1
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 3.4e-11 73.2 137 40.1
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 4.4e-11 72.8 133 40.6
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 7.5e-11 72.0 120 40.8
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 7.5e-11 72.0 131 38.2
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.8e-09 67.4 129 38.8
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.4e-09 67.0 129 37.2
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 4.1e-09 66.2 129 38.0
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 7.0e-09 65.5 133 36.8
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 7.0e-09 65.5 114 39.5
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 7.0e-09 65.5 115 40.0
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 9.1e-09 65.1 139 37.4
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.0e-08 63.9 137 35.8
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.0e-08 63.9 137 35.8
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 2.7e-08 63.5 136 33.8
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 3.5e-08 63.2 137 35.0
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 7.7e-08 62.0 111 41.4
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.0e-07 61.6 136 36.0
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 1.7e-07 60.8 115 39.1
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 3.8e-07 59.7 121 38.0
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 6.5e-07 58.9 64 53.1
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 8.5e-07 58.5 68 45.6
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 1.5e-06 57.8 51 56.9
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 1.5e-06 57.8 119 35.3
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 2.5e-06 57.0 128 34.4
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 3.2e-06 56.6 48 60.4
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 3.2e-06 56.6 114 38.6
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 3.2e-06 56.6 135 34.8
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 4.2e-06 56.2 55 47.3
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 4.2e-06 56.2 50 60.0
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 4.2e-06 56.2 113 38.1
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 5.5e-06 55.8 52 55.8
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 7.2e-06 55.5 39 66.7
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 9.4e-06 55.1 70 47.1


User provided reference genes

Program Settings