Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 0.0e+00 1488.4 750 100.0
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 0.0e+00 1280.4 706 93.1
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 0.0e+00 1264.2 737 88.1
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 0.0e+00 1196.4 706 86.3
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.6e-282 975.3 715 71.5
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 3.2e-280 968.4 723 70.1
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 1.5e-277 959.5 708 69.5
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 9.6e-277 956.8 714 70.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 9.6e-277 956.8 714 70.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 4.5e-274 948.0 696 69.8
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 6.5e-273 944.1 713 70.0
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 6.5e-273 944.1 716 68.3
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 4.2e-272 941.4 708 68.6
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.7e-271 938.7 694 69.0
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 8.7e-270 933.7 752 65.3
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.5e-269 932.9 721 68.4
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 2.5e-269 932.2 713 67.9
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.8e-268 927.9 707 67.6
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 6.3e-268 927.5 706 68.0
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 1.1e-267 926.8 707 67.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 1.4e-267 926.4 681 69.5
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 9.1e-267 923.7 714 67.1
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 1.2e-266 923.3 678 68.7
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 5.9e-266 921.0 715 68.0
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 7.7e-266 920.6 711 66.9
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.3e-265 919.8 724 68.1
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.2e-265 919.1 711 66.9
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 6.5e-265 917.5 678 68.9
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 5.5e-264 914.4 672 68.9
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.1e-263 912.5 711 66.5
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.7e-263 912.1 676 68.3
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 1.8e-262 909.4 716 67.3
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 3.0e-262 908.7 716 66.2
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.0e-261 906.0 707 66.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 2.6e-261 905.6 704 66.5
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 4.4e-261 904.8 678 68.6
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 4.4e-261 904.8 715 66.3
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 1.3e-260 903.3 671 69.0
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.3e-260 903.3 702 66.8
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 1.3e-260 903.3 713 65.8
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 1.3e-260 903.3 710 65.6
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.7e-260 902.9 705 66.8
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 2.2e-257 892.5 678 67.7
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 3.8e-257 891.7 716 65.1
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 5.0e-257 891.3 697 67.6
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 5.0e-257 891.3 703 66.7
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 6.5e-257 891.0 711 65.3
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 1.1e-256 890.2 689 66.2
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 4.7e-255 884.8 718 64.5
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.4e-254 883.2 713 65.9
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 2.3e-254 882.5 677 68.7
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 6.7e-254 880.9 706 64.9
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 3.3e-253 878.6 671 66.5
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 9.7e-253 877.1 691 65.4
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 9.7e-253 877.1 711 65.1
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.7e-252 876.3 698 65.6
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.7e-252 876.3 713 64.5
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 3.7e-252 875.2 713 63.7
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 6.3e-252 874.4 708 65.4
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 1.1e-251 873.6 689 65.5
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.1e-251 873.6 689 65.5
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.1e-251 873.6 701 64.5
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 1.8e-251 872.8 694 65.1
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 1.8e-251 872.8 721 63.7
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 2.4e-251 872.5 674 66.3
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 4.1e-251 871.7 698 64.5
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 4.1e-251 871.7 744 62.2
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.5e-250 868.6 707 64.2
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 5.9e-250 867.8 740 63.6
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 7.7e-250 867.5 709 63.5
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.0e-249 867.1 703 64.4
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 8.2e-244 847.4 673 65.5
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.1e-240 837.0 607 70.2
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 3.6e-239 832.0 676 63.8
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.8e-235 819.7 713 60.9
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 2.4e-235 819.3 718 60.3
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 2.7e-234 815.8 638 67.6
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 6.5e-233 811.2 710 61.1
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 4.2e-232 808.5 601 68.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 2.8e-231 805.8 724 59.3
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 3.0e-230 802.4 704 61.8
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 9.2e-227 790.8 709 60.6
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 2.5e-224 782.7 647 62.0
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 7.3e-224 781.2 597 65.3
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.0e-222 777.3 691 60.2
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 9.5e-216 754.2 632 64.1
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 8.3e-212 741.1 627 62.7
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.7e-209 733.4 579 65.5
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 5.6e-208 728.4 586 64.8
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.3e-204 717.2 648 58.3
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 1.8e-190 670.2 1256 36.7
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 3.1e-174 616.3 670 50.1
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 3.8e-172 609.4 644 51.6
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 3.0e-169 599.7 641 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 7.1e-163 578.6 675 48.3
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.5e-160 570.9 393 69.7
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 6.9e-158 562.0 445 66.3
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 1.3e-151 541.2 406 66.3
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 6.1e-146 522.3 438 65.1
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.6e-120 437.2 731 38.7
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 4.8e-119 433.0 485 48.7
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 1.4e-118 431.4 621 42.8
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.4e-113 414.8 344 62.2
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.8e-113 414.5 277 71.8
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.6e-98 364.8 309 66.7
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.8e-98 364.0 218 80.3
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 3.6e-90 337.0 297 62.0
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 4.4e-88 330.1 281 65.8
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 4.3e-83 313.5 472 43.6
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 7.3e-83 312.8 198 76.8
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 6.2e-82 309.7 269 62.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.9e-81 305.8 198 75.8
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.6e-80 304.3 666 35.6
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 6.7e-60 236.5 150 75.3
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.6e-50 205.3 148 66.2
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 4.3e-43 180.6 144 66.0
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 7.7e-40 169.9 198 51.5
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.3e-31 142.5 103 68.0
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.8e-28 132.1 197 43.1
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 3.0e-28 131.3 99 65.7
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.5e-24 119.0 99 60.6
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.6e-21 109.0 106 51.9
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.7e-18 99.0 68 66.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 1.0e-15 89.7 51 78.4
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.3e-15 89.4 104 51.9
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 3.4e-11 74.7 61 59.0


User provided reference genes

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