Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 5.8e-89 330.9 169 100.0
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.2e-78 296.6 169 90.5
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.8e-50 203.0 113 91.2
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.6e-46 189.9 117 84.6
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.1e-39 167.2 150 61.3
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.5e-39 166.8 148 64.2
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.3e-39 165.6 148 64.9
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.2e-38 163.7 148 59.5
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.8e-38 162.5 123 68.3
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 4.7e-38 161.8 146 63.0
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 8.0e-38 161.0 146 57.5
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.3e-37 159.5 136 64.0
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 3.0e-37 159.1 146 63.0
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.0e-37 159.1 151 59.6
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 1.5e-36 156.8 145 59.3
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.7e-36 154.8 147 61.2
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 9.8e-36 154.1 146 58.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 4.9e-35 151.8 146 62.3
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.1e-34 150.6 150 58.7
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.1e-34 150.6 151 58.9
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 4.1e-34 148.7 143 61.5
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 3.5e-33 145.6 129 63.6
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.5e-33 145.6 150 56.0
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 4.5e-33 145.2 136 61.8
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.3e-32 143.7 148 55.4
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.3e-32 143.7 126 62.7
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 2.3e-32 142.9 143 57.3
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.9e-32 142.5 127 60.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.9e-32 142.5 123 65.9
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 5.0e-32 141.7 145 54.5
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 6.6e-32 141.4 123 65.0
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 6.6e-32 141.4 146 56.2
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 8.6e-32 141.0 123 65.0
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.1e-31 140.6 153 56.9
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.1e-31 140.6 153 56.9
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 1.5e-31 140.2 148 56.1
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.5e-31 140.2 152 58.6
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 2.5e-31 139.4 132 59.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.1e-30 136.3 153 54.2
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 2.8e-30 136.0 148 54.7
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 3.6e-30 135.6 144 56.2
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 4.7e-30 135.2 143 57.3
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 4.7e-30 135.2 151 54.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 8.0e-30 134.4 151 55.6
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 1.4e-29 133.7 141 56.7
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 3.1e-29 132.5 150 55.3
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 6.8e-29 131.3 143 53.1
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 8.9e-29 131.0 136 62.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 2.0e-28 129.8 100 66.0
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.0e-28 129.8 154 53.2
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 7.5e-28 127.9 143 53.8
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.7e-27 126.7 148 56.1
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 6.4e-27 124.8 87 73.6
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.4e-26 122.9 144 51.4
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.4e-26 122.9 126 55.6
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 5.4e-26 121.7 101 63.4
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 7.0e-26 121.3 137 56.2
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.2e-25 120.6 145 49.7
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.6e-25 120.2 155 51.6
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 2.7e-25 119.4 90 65.6
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.7e-25 119.4 145 49.0
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.5e-25 119.0 127 55.9
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 3.5e-25 119.0 110 61.8
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 4.6e-25 118.6 84 73.8
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 6.0e-25 118.2 145 48.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.0e-24 117.5 150 48.7
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.0e-24 117.5 152 50.7
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.7e-24 116.7 98 68.4
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.3e-24 116.3 121 56.2
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 2.3e-24 116.3 129 53.5
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 3.0e-24 115.9 139 51.8
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 3.0e-24 115.9 144 51.4
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 3.9e-24 115.5 122 55.7
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 5.0e-24 115.2 135 50.4
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 6.6e-24 114.8 135 52.6
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.5e-23 113.6 116 56.9
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.9e-23 113.2 127 54.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.9e-23 113.2 113 57.5
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.9e-23 113.2 72 79.2
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.9e-23 113.2 124 54.8
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.9e-23 113.2 99 58.6
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 3.3e-23 112.5 155 49.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 3.3e-23 112.5 81 74.1
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 4.3e-23 112.1 155 48.4
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 4.3e-23 112.1 113 57.5
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 9.5e-23 110.9 154 47.4
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 9.5e-23 110.9 112 57.1
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.6e-22 110.2 104 58.7
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.6e-22 109.0 157 47.8
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.7e-22 108.6 120 55.0
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.3e-21 106.3 87 66.7
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 4.0e-21 105.5 64 82.8
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 8.9e-21 104.4 74 71.6
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 5.8e-20 101.7 139 46.0
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 6.4e-19 98.2 75 64.0
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 8.3e-19 97.8 75 64.0
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.4e-18 97.1 87 56.3
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 1.9e-18 96.7 124 48.4
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 3.2e-18 95.9 96 53.1
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 4.1e-18 95.5 139 43.2
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 2.1e-17 93.2 74 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.7e-17 92.8 150 44.0
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 7.8e-17 91.3 114 45.6
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.1e-15 87.4 149 36.9
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.5e-15 87.0 77 61.0
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 2.5e-15 86.3 97 51.5
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.8e-13 80.1 57 68.4
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.9e-11 72.8 49 71.4
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 7.3e-07 58.2 99 44.4


User provided reference genes

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