Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003930.2 Cucumis melo HOM05D000925 ORTHO05D001623 8.1e-35 149.8 74 100.0
ClCG07G015530 Citrullus lanatus HOM05D000925 ORTHO05D001623 7.6e-17 90.1 59 79.7
MELO3C017731.2 Cucumis melo HOM05D000925 ORTHO05D001623 7.6e-17 90.1 59 79.7
CsaV3_4G003160 Cucumis sativus L. HOM05D000925 ORTHO05D001623 7.6e-17 90.1 59 79.7
Cfa015766 Carpinus fangiana HOM05D008684 ORTHO05D010796 4.3e-12 74.3 59 71.2
Sed0003267 Sechium edule HOM05D000925 ORTHO05D001623 7.4e-12 73.6 58 70.7
Prupe.1G189800 Prunus persica HOM05D000925 ORTHO05D001623 1.6e-11 72.4 71 59.2
Sed0024492 Sechium edule HOM05D000925 ORTHO05D001623 2.8e-11 71.6 59 67.8
CiPaw.01G102100 Carya illinoinensis HOM05D000925 ORTHO05D001623 3.7e-11 71.2 59 67.8
Cpa.g.sc71.14 Carica papaya HOM05D000925 ORTHO05D001623 4.0e-10 67.8 59 62.7
CiPaw.02G056000 Carya illinoinensis HOM05D000925 ORTHO05D001623 9.0e-10 66.6 59 64.4
Lj6A59T26 Lonicera japonica HOM05D000925 ORTHO05D001623 1.2e-09 66.2 59 64.4
Thecc.05G003600 Theobroma cacao HOM05D000925 ORTHO05D001623 1.5e-09 65.9 59 61.0
RcHm_v2.0_Chr0c40g0503391 Rosa chinensis HOM05D000925 ORTHO05D001623 2.0e-09 65.5 54 70.4
RcHm_v2.0_Chr4g0407341 Rosa chinensis HOM05D000925 ORTHO05D001623 2.0e-09 65.5 54 70.4
TAR362G1173 Trochodendron aralioides HOM05D000925 ORTHO05D001623 2.0e-09 65.5 63 55.6
TAR633G0580 Trochodendron aralioides HOM05D000925 ORTHO05D001623 4.5e-09 64.3 59 59.3
CSS0038754 Camellia sinensis var. sinensis HOM05D000925 ORTHO05D001623 5.8e-09 63.9 59 55.9
Dinv22715 Davidia involucrata HOM05D000925 ORTHO05D001623 1.0e-08 63.2 59 55.9
MBI08_g17987_MAGBIO Magnolia biondii HOM05D000925 ORTHO05D001623 1.0e-08 63.2 59 55.9
Potri.007G126700 Populus trichocarpa HOM05D000925 ORTHO05D001623 1.0e-08 63.2 60 63.3
Potri.017G032800 Populus trichocarpa HOM05D000925 ORTHO05D001623 1.0e-08 63.2 59 59.3
GSVIVG01010739001 Vitis vinifera HOM05D004916 ORTHO05D001623 1.0e-08 63.2 59 61.0
Lsat_1_v5_gn_6_55301 Lactuca sativa HOM05D000925 ORTHO05D001623 1.3e-08 62.8 58 58.6
Sabra17G0020600 Salix brachista HOM05D000925 ORTHO05D001623 1.3e-08 62.8 58 56.9
ECA233G2175 Erigeron canadensis HOM05D000925 ORTHO05D001623 1.7e-08 62.4 60 56.7
QL10p048174 Quercus lobata HOM05D000925 ORTHO05D001623 1.7e-08 62.4 59 64.4
Sed0023768 Sechium edule HOM05D000925 ORTHO05D001623 2.2e-08 62.0 59 57.6
Duzib093G1454 Durio zibethinus HOM05D000925 ORTHO05D001623 2.9e-08 61.6 58 56.9
HanXRQChr02g0058001 Helianthus annuus HOM05D000925 ORTHO05D001623 3.8e-08 61.2 57 57.9
Lsat_1_v5_gn_2_51320 Lactuca sativa HOM05D000925 ORTHO05D001623 3.8e-08 61.2 59 61.0
ClCG08G004360 Citrullus lanatus HOM05D000925 ORTHO05D001623 4.9e-08 60.8 58 58.6
MELO3C011635.2 Cucumis melo HOM05D000925 ORTHO05D001623 6.5e-08 60.5 59 57.6
CsaV3_6G003800 Cucumis sativus L. HOM05D000925 ORTHO05D001623 6.5e-08 60.5 59 57.6
Manes.04G041140 Manihot esculenta HOM05D000925 ORTHO05D001623 1.9e-07 58.9 59 57.6
VMungo0720G0648 Vigna mungo HOM05D000925 ORTHO05D001623 1.9e-07 58.9 58 56.9
CSS0026799 Camellia sinensis var. sinensis HOM05D000925 ORTHO05D001623 2.5e-07 58.5 58 56.9
vmacro15643 Vaccinium macrocarpon HOM05D000925 ORTHO05D001623 2.5e-07 58.5 59 55.9
Manes.11G117600 Manihot esculenta HOM05D000925 ORTHO05D001623 3.2e-07 58.2 60 58.3
Hma1.2p1_0754F.1_g213120 Hydrangea macrophylla HOM05D000925 ORTHO05D001623 4.2e-07 57.8 59 55.9
Actinidia34616 Actinidia chinensis HOM05D000925 ORTHO05D001623 7.1e-07 57.0 59 55.9
COL.COLO4_14423 Corchorus olitorius HOM05D000925 ORTHO05D001623 7.1e-07 57.0 76 43.4
Rhsim02G0076000 Rhododendron simsii HOM05D000925 ORTHO05D001623 7.1e-07 57.0 59 54.2
vmacro00607 Vaccinium macrocarpon HOM05D000925 ORTHO05D001623 7.1e-07 57.0 59 52.5
FvH4_4g11250 Fragaria vesca HOM05D000925 ORTHO05D001623 9.3e-07 56.6 37 75.7
FAN07G0453 Fragaria x ananassa HOM05D000925 ORTHO05D001623 9.3e-07 56.6 37 75.7
Actinidia35966 Actinidia chinensis HOM05D000925 ORTHO05D001623 1.2e-06 56.2 59 54.2
A04p24180 Brassica napus HOM05D000925 ORTHO05D001623 1.2e-06 56.2 59 50.8
Atru.chr3.1556 Acer truncatum HOM05D000925 ORTHO05D001623 1.6e-06 55.8 41 68.3
Atru.chr3.1577 Acer truncatum HOM05D000925 ORTHO05D001623 1.6e-06 55.8 41 68.3
AL1G15810 Arabidopsis lyrata HOM05D000925 ORTHO05D001623 2.1e-06 55.5 59 54.2
PSO017G3190 Papaver somniferum HOM05D000925 ORTHO05D001623 2.1e-06 55.5 74 43.2
Lsat_1_v5_gn_1_71681 Lactuca sativa HOM05D000925 ORTHO05D001623 2.7e-06 55.1 59 57.6
PSO675G5879 Papaver somniferum HOM05D000925 ORTHO05D001623 2.7e-06 55.1 72 43.1
THA.LOC104802305 Tarenaya hassleriana HOM05D000925 ORTHO05D001623 3.5e-06 54.7 57 52.6
Atru.chr5.842 Acer truncatum HOM05D004916 ORTHO05D006147 4.6e-06 54.3 65 53.8
Gohir.A01G230900 Gossypium hirsutum HOM05D000925 ORTHO05D001623 4.6e-06 54.3 59 54.2
Gohir.D01G221000 Gossypium hirsutum HOM05D000925 ORTHO05D001623 4.6e-06 54.3 59 54.2
Gorai.002G267600 Gossypium raimondii HOM05D000925 ORTHO05D001623 4.6e-06 54.3 59 54.2
MBI11_g35024_MAGBIO Magnolia biondii HOM05D000925 ORTHO05D001623 4.6e-06 54.3 38 68.4
EL10Ac3g05577 Beta vulgaris HOM05D000925 ORTHO05D001623 6.0e-06 53.9 63 49.2
Carub.0001s0523 Capsella rubella HOM05D000925 ORTHO05D001623 6.0e-06 53.9 59 50.8
Nitab4.5_0002368g0040 Nicotiana tabacum HOM05D000925 ORTHO05D001623 6.0e-06 53.9 59 52.5
Nitab4.5_0004579g0030 Nicotiana tabacum HOM05D000925 ORTHO05D001623 6.0e-06 53.9 59 52.5
SEGI_27890 Sequoiadendron giganteum HOM05D000925 ORTHO05D001623 6.0e-06 53.9 66 51.5
Lalb_Chr02g0144341 Lupinus albus HOM05D000925 ORTHO05D001623 7.9e-06 53.5 51 56.9
Os11g0282300 Oryza sativa ssp. japonica HOM05D000925 ORTHO05D001623 7.9e-06 53.5 59 50.8


User provided reference genes

Program Settings