Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 0.0e+00 1095.1 540 100.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.9e-306 1055.0 540 95.4
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.2e-274 948.0 541 85.4
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.7e-262 909.1 540 83.9
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.0e-211 740.3 540 65.4
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 3.6e-209 731.9 542 63.7
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 4.7e-209 731.5 540 63.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 4.0e-208 728.4 567 60.8
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.4e-206 721.1 540 62.2
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 3.5e-204 715.3 540 62.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 3.6e-201 705.3 540 61.3
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 5.8e-199 698.0 540 61.5
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.2e-198 696.0 540 60.2
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 8.4e-198 694.1 543 61.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.4e-197 691.4 540 60.6
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 7.1e-197 691.0 543 61.0
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 2.7e-196 689.1 541 60.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 4.6e-196 688.3 540 61.1
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.6e-196 688.3 542 61.3
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 1.0e-195 687.2 540 60.0
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 6.7e-195 684.5 540 60.0
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 6.7e-195 684.5 540 59.4
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.6e-194 681.4 540 59.6
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.8e-192 676.4 542 60.0
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 9.0e-192 674.1 541 60.1
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 3.4e-191 672.2 542 59.2
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.4e-191 672.2 542 58.9
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.2e-190 669.5 543 59.7
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.2e-190 669.5 540 57.4
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.9e-190 668.3 543 61.0
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 5.5e-189 664.8 540 58.0
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 9.3e-189 664.1 540 56.9
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.3e-187 660.2 540 56.3
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 2.3e-187 659.4 540 57.4
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.1e-187 658.3 540 58.0
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 2.1e-185 652.9 543 56.0
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.4e-184 650.2 540 57.0
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 3.1e-184 649.0 545 57.8
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 7.6e-183 644.4 540 58.5
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 1.7e-182 643.3 542 54.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 2.2e-182 642.9 542 57.4
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 2.2e-182 642.9 540 56.7
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.2e-181 639.0 542 54.4
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 5.5e-181 638.3 542 54.8
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 2.1e-180 636.3 542 54.2
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.1e-180 636.3 542 54.2
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 3.5e-180 635.6 541 57.1
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 3.5e-180 635.6 541 57.1
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 6.0e-180 634.8 543 54.3
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.0e-179 634.0 540 56.7
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.8e-179 633.3 540 56.3
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 3.0e-179 632.5 543 54.0
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.0e-179 632.5 542 54.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 1.1e-178 630.6 541 57.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.5e-178 630.2 543 54.0
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.5e-178 630.2 542 56.8
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.2e-177 626.3 540 55.2
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.1e-176 624.0 540 57.4
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.1e-176 624.0 543 56.2
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.4e-176 623.6 545 56.1
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 4.1e-176 622.1 541 54.3
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 4.1e-176 622.1 563 54.2
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 6.9e-176 621.3 542 56.8
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 2.6e-175 619.4 540 53.9
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 7.6e-175 617.8 573 51.1
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.4e-173 613.6 543 55.4
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 2.1e-172 609.8 543 54.9
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 3.6e-172 609.0 543 55.1
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 1.3e-171 607.1 536 53.9
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 8.8e-171 604.4 536 53.9
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.9e-170 603.2 602 52.8
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 1.9e-170 603.2 542 53.5
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 3.3e-170 602.4 541 54.0
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 9.7e-170 600.9 540 53.7
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.8e-169 599.4 540 53.7
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.3e-169 598.2 633 47.9
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 4.5e-167 592.0 540 53.9
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 4.5e-167 592.0 541 51.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 2.2e-166 589.7 489 57.3
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.5e-165 586.3 471 59.2
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 3.6e-164 582.4 491 56.8
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 2.0e-162 576.6 548 53.1
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 7.4e-162 574.7 544 53.9
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-161 573.9 548 52.9
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 7.7e-159 564.7 542 50.0
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.6e-156 557.0 427 63.0
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.1e-154 550.8 457 56.0
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 7.5e-146 521.5 592 45.6
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.4e-144 517.3 470 52.6
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 4.5e-143 512.3 543 48.6
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.3e-142 510.8 447 54.4
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.1e-141 507.7 559 48.5
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 1.1e-136 491.1 540 48.0
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 6.5e-134 481.9 469 50.7
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 5.5e-133 478.8 559 45.8
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 7.5e-130 468.4 559 45.6
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.9e-126 456.4 553 44.7
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 5.2e-115 419.1 508 43.3
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.2e-114 417.9 309 64.1
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 3.1e-107 393.3 400 48.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 7.8e-95 352.1 521 37.2
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 8.7e-86 322.0 559 34.3
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.3e-78 297.4 223 63.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.3e-76 291.6 493 36.1
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 6.4e-73 279.3 471 36.3
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.4e-72 278.1 577 34.7
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.6e-71 274.6 569 34.4
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 2.3e-62 244.2 210 54.3
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.4e-54 218.4 186 55.9
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.1e-43 180.6 109 74.3
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 1.2e-42 178.7 260 36.9
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 5.0e-33 146.7 197 42.6
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 2.6e-29 134.4 125 54.4
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 7.5e-29 132.9 76 82.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 4.8e-28 130.2 119 47.1
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.0e-17 95.9 58 67.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 9.8e-13 79.3 77 51.9
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 3.3e-08 64.3 57 54.4


User provided reference genes

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