Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 9.4e-73 276.9 158 100.0
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.0e-71 273.5 158 98.1
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.2e-65 251.9 151 95.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 8.8e-63 243.8 159 88.7
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 4.5e-59 231.5 159 84.9
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 4.2e-57 224.9 161 82.6
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.2e-56 223.4 158 82.3
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.6e-56 223.0 166 78.3
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.7e-56 222.2 160 83.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.6e-56 221.9 158 82.3
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 6.1e-56 221.1 158 81.6
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.8e-55 219.5 159 82.4
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.8e-55 219.5 159 80.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.0e-55 218.4 158 81.6
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.0e-55 218.4 160 81.2
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 8.8e-55 217.2 158 81.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 8.8e-55 217.2 159 78.6
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.6e-54 215.7 159 82.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.6e-54 215.7 161 80.1
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.4e-54 214.9 159 82.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 4.4e-54 214.9 161 81.4
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 4.4e-54 214.9 162 82.1
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.4e-54 214.9 158 81.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 5.7e-54 214.5 165 76.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 5.7e-54 214.5 160 78.8
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 7.5e-54 214.2 159 79.2
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 6.3e-53 211.1 151 82.8
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.4e-52 209.9 160 79.4
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.8e-52 209.5 161 80.7
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.8e-52 209.5 162 79.6
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.1e-52 208.8 160 78.1
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 4.1e-52 208.4 159 78.0
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 5.3e-52 208.0 160 80.6
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 7.0e-52 207.6 160 79.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.5e-51 204.9 169 75.7
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 5.9e-51 204.5 161 77.0
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.2e-50 202.6 158 77.2
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 2.2e-50 202.6 160 76.9
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 2.9e-50 202.2 160 76.2
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 2.9e-50 202.2 159 79.2
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 5.0e-50 201.4 151 80.1
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.5e-50 200.7 154 80.5
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.1e-49 200.3 158 78.5
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.1e-49 200.3 161 78.3
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.5e-49 199.9 160 76.2
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 4.2e-49 198.4 167 73.1
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 7.2e-49 197.6 160 76.9
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.1e-48 194.5 197 64.5
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 6.1e-48 194.5 150 80.0
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.4e-47 193.4 158 72.8
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 2.3e-47 192.6 151 77.5
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 5.2e-47 191.4 152 75.7
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.2e-46 190.3 157 76.4
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.0e-46 189.5 159 76.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 5.7e-46 188.0 152 77.6
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 7.5e-46 187.6 198 63.1
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 9.8e-46 187.2 156 75.0
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 9.8e-46 187.2 161 74.5
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 9.8e-46 187.2 155 73.5
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 6.3e-45 184.5 193 52.8
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-44 183.7 155 72.3
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.8e-44 183.0 157 75.2
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.4e-44 182.6 150 73.3
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 4.1e-44 181.8 156 74.4
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 5.4e-44 181.4 158 74.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 7.0e-44 181.0 160 74.4
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.6e-43 179.9 160 71.9
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 7.7e-43 177.6 150 74.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.0e-42 177.2 154 74.7
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.3e-42 176.8 157 70.7
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.3e-42 176.8 150 74.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.7e-42 176.4 157 71.3
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 2.9e-42 175.6 153 71.2
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.8e-42 175.3 151 72.8
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 5.0e-42 174.9 149 71.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 5.0e-42 174.9 150 72.7
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 6.5e-42 174.5 157 73.2
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 6.5e-42 174.5 158 73.4
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.5e-41 173.3 150 72.0
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.5e-41 172.6 158 69.6
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.7e-40 169.1 123 81.3
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.4e-39 166.8 144 72.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.8e-39 166.4 161 70.2
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.8e-39 166.4 171 57.3
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.3e-39 166.0 144 72.2
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 3.0e-39 165.6 144 72.2
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-39 165.2 144 72.2
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 6.8e-39 164.5 165 64.8
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 2.8e-37 159.1 185 50.8
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.8e-36 156.4 127 71.7
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 4.5e-35 151.8 154 54.5
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.1e-33 147.1 115 71.3
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.5e-33 146.0 115 72.2
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 4.3e-33 145.2 153 65.4
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 7.3e-33 144.4 102 74.5
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 6.1e-32 141.4 150 62.7
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 2.3e-31 139.4 115 72.2
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 6.8e-31 137.9 108 68.5
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 9.2e-28 127.5 123 60.2
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.2e-27 127.1 140 55.0
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.5e-25 119.4 160 53.1
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.6e-22 109.4 98 59.2
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.4e-20 102.8 167 44.3
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.6e-16 90.1 96 53.1
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 8.9e-15 84.3 91 50.5
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 2.9e-13 79.3 103 49.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.4e-12 77.0 60 63.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 3.0e-10 69.3 96 41.7
FAN27G0088 Fragaria x ananassa HOM05D007166 ORTHO05D009039 9.5e-09 64.3 56 62.5
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 8.1e-08 61.2 67 53.7


User provided reference genes

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