Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003749.2 Cucumis melo HOM05D005726 ORTHO05D001733 2.4e-63 245.4 126 100.0
CsaV3_3G045890 Cucumis sativus L. HOM05D005726 ORTHO05D001733 8.6e-61 236.9 126 96.0
ClCG05G018250 Citrullus lanatus HOM05D005726 ORTHO05D001733 1.8e-58 229.2 126 92.1
Sed0014046 Sechium edule HOM05D005726 ORTHO05D001733 4.0e-50 201.4 126 83.3
CiPaw.07G149600 Carya illinoinensis HOM05D005726 ORTHO05D001733 2.5e-20 102.4 132 44.7
Sed0021833 Sechium edule HOM05D005726 ORTHO05D001733 9.6e-20 100.5 134 43.3
QL02p011637 Quercus lobata HOM05D005726 ORTHO05D001733 3.1e-18 95.5 132 42.4
Potri.002G022100 Populus trichocarpa HOM05D005726 ORTHO05D001733 9.9e-17 90.5 132 40.2
Thecc.08G044700 Theobroma cacao HOM05D005726 ORTHO05D001733 2.2e-16 89.4 131 39.7
Cfa013952 Carpinus fangiana HOM05D005726 ORTHO05D001733 3.8e-16 88.6 135 39.3
CANSAT01G1229 Cannabis sativa HOM05D005726 ORTHO05D001733 6.4e-16 87.8 146 37.0
CANSAT25G0582 Cannabis sativa HOM05D005726 ORTHO05D001733 1.1e-15 87.0 135 40.7
Haze_22635 Corylus avellana HOM05D005726 ORTHO05D001733 1.1e-15 87.0 135 38.5
Atru.chr5.3224 Acer truncatum HOM05D005726 ORTHO05D001733 1.9e-15 86.3 130 40.0
CsaV3_2G029540 Cucumis sativus L. HOM05D005726 ORTHO05D001733 2.4e-15 85.9 135 39.3
Duzib132G0889 Durio zibethinus HOM05D005726 ORTHO05D001733 4.2e-15 85.1 133 37.6
RcHm_v2.0_Chr6g0245271 Rosa chinensis HOM05D005726 ORTHO05D001733 5.4e-15 84.7 136 37.5
Cc02_g16550 Coffea canephora HOM05D005726 ORTHO05D001733 7.1e-15 84.3 126 36.5
Gohir.D12G033000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 1.6e-14 83.2 133 36.8
Gorai.008G033800 Gossypium raimondii HOM05D005726 ORTHO05D001733 1.6e-14 83.2 133 36.8
COL.COLO4_17253 Corchorus olitorius HOM05D005726 ORTHO05D001733 2.7e-14 82.4 135 40.7
Eucgr.F00586 Eucalyptus grandis HOM05D005726 ORTHO05D001733 2.7e-14 82.4 133 39.8
Gohir.A06G004000 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.7e-14 82.4 131 35.1
Gohir.A12G039400 Gossypium hirsutum HOM05D005726 ORTHO05D001733 2.7e-14 82.4 133 36.8
Gorai.010G004200 Gossypium raimondii HOM05D005726 ORTHO05D001733 3.5e-14 82.0 131 35.1
TWI56G0219 Tripterygium wilfordii HOM05D005726 ORTHO05D001733 3.5e-14 82.0 132 39.4
Cfa005182 Carpinus fangiana HOM05D005726 ORTHO05D001733 6.0e-14 81.3 133 36.1
MBI05_g33718_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 6.0e-14 81.3 133 36.1
Nn5g30142 Nelumbo nucifera HOM05D005726 ORTHO05D001733 6.0e-14 81.3 133 37.6
Ciclev10003161m.g Citrus clementina HOM05D005726 ORTHO05D001733 7.9e-14 80.9 126 37.3
Gohir.D06G006900 Gossypium hirsutum HOM05D005726 ORTHO05D001733 7.9e-14 80.9 131 34.4
Atru.chr13.290 Acer truncatum HOM05D005726 ORTHO05D001733 1.3e-13 80.1 132 36.4
RcHm_v2.0_Chr6g0302871 Rosa chinensis HOM05D005726 ORTHO05D001733 2.3e-13 79.3 131 40.5
Potri.004G167800 Populus trichocarpa HOM05D005726 ORTHO05D001733 3.0e-13 79.0 133 36.8
Migut.N01283 Erythranthe guttata HOM05D005726 ORTHO05D001733 3.9e-13 78.6 140 35.0
Potri.009G129301 Populus trichocarpa HOM05D005726 ORTHO05D001733 3.9e-13 78.6 133 35.3
PGR031G2508 Punica granatum HOM05D005726 ORTHO05D001733 3.9e-13 78.6 134 37.3
Nn1g05896 Nelumbo nucifera HOM05D005726 ORTHO05D001733 5.1e-13 78.2 134 35.8
ClCG02G011420 Citrullus lanatus HOM05D005726 ORTHO05D001733 6.6e-13 77.8 125 38.4
Haze_02200 Corylus avellana HOM05D005726 ORTHO05D001733 8.7e-13 77.4 133 34.6
Lalb_Chr11g0061921 Lupinus albus HOM05D005726 ORTHO05D001733 8.7e-13 77.4 135 37.0
PSO170G6562 Papaver somniferum HOM05D005726 ORTHO05D001733 8.7e-13 77.4 148 31.1
DCAR_003698 Daucus carota HOM05D005726 ORTHO05D001733 1.9e-12 76.3 132 37.1
TAR625G1501 Trochodendron aralioides HOM05D005726 ORTHO05D001733 5.6e-12 74.7 133 36.1
MD05G1115600 Malus domestica HOM05D005726 ORTHO05D001733 7.4e-12 74.3 137 34.3
Phvul.009G017000 Phaseolus vulgaris HOM05D005726 ORTHO05D001733 7.4e-12 74.3 142 34.5
Manes.05G147300 Manihot esculenta HOM05D005726 ORTHO05D001733 9.6e-12 73.9 133 37.6
TAR376G0138 Trochodendron aralioides HOM05D005726 ORTHO05D001733 1.3e-11 73.6 119 38.7
Prupe.8G160400 Prunus persica HOM05D005726 ORTHO05D001733 1.6e-11 73.2 141 37.6
THA.LOC104821582 Tarenaya hassleriana HOM05D005726 ORTHO05D001733 2.1e-11 72.8 140 37.9
Ciclev10029543m.g Citrus clementina HOM05D005726 ORTHO05D001733 2.8e-11 72.4 135 35.6
VMungo1309G2498 Vigna mungo HOM05D005726 ORTHO05D001733 2.8e-11 72.4 136 35.3
Actinidia00594 Actinidia chinensis HOM05D005726 ORTHO05D001733 4.8e-11 71.6 117 39.3
Cpa.g.sc26.44 Carica papaya HOM05D005726 ORTHO05D001733 4.8e-11 71.6 119 37.8
Ciclev10029854m.g Citrus clementina HOM05D005726 ORTHO05D001733 4.8e-11 71.6 135 34.8
Glyma.04G024200 Glycine max HOM05D005726 ORTHO05D001733 4.8e-11 71.6 142 35.9
MBI05_g46327_MAGBIO Magnolia biondii HOM05D005726 ORTHO05D001733 4.8e-11 71.6 118 37.3
AT5G42146 Arabidopsis thaliana HOM05D005726 ORTHO05D001733 6.2e-11 71.2 135 33.3
AL8G19700 Arabidopsis lyrata HOM05D005726 ORTHO05D001733 1.1e-10 70.5 135 33.3
CiPaw.05G077000 Carya illinoinensis HOM05D005726 ORTHO05D001733 1.1e-10 70.5 133 34.6
AL8G19720 Arabidopsis lyrata HOM05D005726 ORTHO05D001733 1.4e-10 70.1 135 33.3
CARHR284740 Cardamine hirsuta HOM05D005726 ORTHO05D001733 1.4e-10 70.1 135 34.1
Thecc.02G067200 Theobroma cacao HOM05D005726 ORTHO05D001733 1.4e-10 70.1 133 32.3
BcaC04g23031 Brassica carinata HOM05D005726 ORTHO05D001733 4.0e-10 68.6 135 33.3
C09p12890 Brassica napus HOM05D005726 ORTHO05D001733 4.0e-10 68.6 135 33.3
BolC9t54179H Brassica oleracea HOM05D005726 ORTHO05D001733 4.0e-10 68.6 135 33.3
Sed0019554 Sechium edule HOM05D005726 ORTHO05D001733 4.0e-10 68.6 126 32.5
BcaB07g31777 Brassica carinata HOM05D005726 ORTHO05D001733 5.3e-10 68.2 135 33.3
A09p10920 Brassica napus HOM05D005726 ORTHO05D001733 9.0e-10 67.4 135 32.6
BraA09t36732Z Brassica rapa HOM05D005726 ORTHO05D001733 9.0e-10 67.4 135 32.6
FAN04G1699 Fragaria x ananassa HOM05D005726 ORTHO05D001733 9.0e-10 67.4 116 36.2
Sed0014638 Sechium edule HOM05D005726 ORTHO05D001733 9.0e-10 67.4 126 34.1
Carub.0008s0720 Capsella rubella HOM05D005726 ORTHO05D001733 1.5e-09 66.6 135 32.6
Prupe.1G365100 Prunus persica HOM05D005726 ORTHO05D001733 1.5e-09 66.6 132 34.8
Cpa.g.sc37.193 Carica papaya HOM05D005726 ORTHO05D001733 2.6e-09 65.9 133 35.3
MD10G1118100 Malus domestica HOM05D005726 ORTHO05D001733 2.6e-09 65.9 135 33.3
Sp2g14650 Schrenkiella parvula HOM05D005726 ORTHO05D001733 2.6e-09 65.9 135 33.3
QL11p047517 Quercus lobata HOM05D005726 ORTHO05D001733 3.4e-09 65.5 133 33.8
Sabra09G0098800 Salix brachista HOM05D005726 ORTHO05D001733 1.3e-08 63.5 111 34.2
MELO3C020779.2 Cucumis melo HOM05D005726 ORTHO05D001733 3.8e-08 62.0 120 35.0
CsaV3_2G015680 Cucumis sativus L. HOM05D005726 ORTHO05D001733 6.4e-08 61.2 120 35.8
MD08G1013100 Malus domestica HOM05D005726 ORTHO05D001733 1.9e-07 59.7 131 31.3
ATR0810G150 Amborella trichopoda HOM05D005726 ORTHO05D001733 5.5e-07 58.2 127 33.1
Oeu037538.1 Olea europaea HOM05D005726 ORTHO05D001733 2.7e-06 55.8 129 27.9


User provided reference genes

Program Settings