Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 6.5e-71 270.8 154 100.0
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 6.8e-68 260.8 153 96.7
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.3e-50 203.4 128 92.2
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.4e-49 199.9 128 91.4
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 3.5e-48 195.3 128 87.5
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 1.9e-38 162.9 129 77.5
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 1.4e-25 120.2 131 59.5
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 2.7e-24 115.9 127 54.3
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 1.0e-23 114.0 105 59.0
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.7e-23 110.9 109 56.0
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.1e-22 110.5 128 51.6
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 1.5e-22 110.2 127 58.3
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 2.5e-22 109.4 108 62.0
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 3.3e-22 109.0 125 52.8
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 4.3e-22 108.6 134 51.5
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 7.3e-22 107.8 110 56.4
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 7.3e-22 107.8 124 48.4
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 9.6e-22 107.5 124 52.4
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 9.6e-22 107.5 112 54.5
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 1.3e-21 107.1 135 57.0
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 1.3e-21 107.1 127 56.7
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 1.3e-21 107.1 129 55.8
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 1.6e-21 106.7 151 45.0
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 2.8e-21 105.9 125 55.2
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 4.8e-21 105.1 135 56.3
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 4.8e-21 105.1 130 48.5
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 6.2e-21 104.8 133 53.4
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 8.1e-21 104.4 111 64.9
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 8.1e-21 104.4 125 56.8
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 1.1e-20 104.0 105 53.3
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 3.1e-20 102.4 130 53.8
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 3.1e-20 102.4 140 47.1
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 6.9e-20 101.3 97 66.0
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 1.2e-19 100.5 134 48.5
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 2.0e-19 99.8 135 54.8
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 3.4e-19 99.0 106 60.4
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 3.4e-19 99.0 110 58.2
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 4.4e-19 98.6 118 61.0
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.4e-19 98.6 126 57.9
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 5.8e-19 98.2 106 59.4
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 7.6e-19 97.8 105 53.3
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 2.9e-18 95.9 132 51.5
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 3.8e-18 95.5 125 52.0
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 4.9e-18 95.1 119 53.8
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 4.9e-18 95.1 106 60.4
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 6.4e-18 94.7 132 45.5
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 8.4e-18 94.4 128 48.4
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 1.4e-17 93.6 106 55.7
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 1.9e-17 93.2 132 50.0
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 1.9e-17 93.2 103 49.5
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 2.4e-17 92.8 125 50.4
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 2.4e-17 92.8 125 50.4
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 2.4e-17 92.8 107 53.3
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 3.2e-17 92.4 112 57.1
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 3.2e-17 92.4 106 60.4
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 3.2e-17 92.4 130 43.1
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 5.4e-17 91.7 108 54.6
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 9.3e-17 90.9 108 51.9
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 1.2e-16 90.5 101 52.5
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 1.6e-16 90.1 105 48.6
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 1.6e-16 90.1 103 54.4
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 2.7e-16 89.4 104 54.8
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 3.5e-16 89.0 126 46.0
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 3.5e-16 89.0 111 56.8
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.0e-15 87.4 104 56.7
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 1.0e-15 87.4 144 49.3
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.3e-15 87.0 127 45.7
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 1.7e-15 86.7 106 52.8
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.3e-15 86.3 105 58.1
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 3.0e-15 85.9 112 49.1
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 6.6e-15 84.7 105 57.1
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 8.7e-15 84.3 105 53.3
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 1.1e-14 84.0 107 54.2
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.5e-14 83.6 108 45.4
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 1.5e-14 83.6 109 51.4
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 1.5e-14 83.6 132 38.6
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 5.6e-14 81.6 101 57.4
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 9.6e-14 80.9 132 47.0
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 9.6e-14 80.9 109 44.0
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 2.1e-13 79.7 156 37.8
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 3.6e-13 79.0 118 44.1
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 6.2e-13 78.2 44 93.2
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 8.1e-13 77.8 103 53.4
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 1.4e-12 77.0 114 43.9
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.0e-12 75.5 98 46.9
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 4.0e-12 75.5 100 44.0
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 5.3e-12 75.1 100 55.0
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 4.5e-11 72.0 103 42.7
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 5.8e-11 71.6 103 49.5
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 9.9e-11 70.9 100 44.0
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 1.7e-10 70.1 126 44.4
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 2.2e-10 69.7 103 49.5
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 2.2e-10 69.7 116 38.8
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 2.9e-10 69.3 139 40.3
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 4.9e-10 68.6 105 38.1
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 6.4e-10 68.2 108 50.9
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 6.4e-10 68.2 51 64.7
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.2e-09 65.5 102 46.1
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 2.1e-08 63.2 120 41.7
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 4.6e-08 62.0 128 40.6
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 1.0e-07 60.8 119 37.0
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 1.8e-07 60.1 95 44.2
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.9e-07 58.9 101 33.7
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 6.7e-07 58.2 87 50.6
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 8.7e-07 57.8 94 41.5
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.5e-06 57.0 139 29.5
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 3.3e-06 55.8 88 43.2


User provided reference genes

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