Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 2.1e-141 505.8 271 100.0
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 3.4e-123 445.3 308 79.9
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 4.9e-122 441.4 319 77.4
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 2.0e-115 419.5 316 74.1
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 3.9e-79 298.9 306 54.9
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 3.7e-77 292.4 217 71.4
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 4.8e-77 292.0 306 53.9
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 4.8e-77 292.0 307 54.1
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.1e-76 290.8 307 53.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 1.8e-76 290.0 308 54.2
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.8e-76 290.0 307 53.7
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 3.1e-76 289.3 304 55.3
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.6e-75 287.0 307 52.8
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 3.8e-74 282.3 308 53.9
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 8.5e-74 281.2 308 52.6
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.1e-73 280.8 308 53.2
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.1e-73 280.8 308 53.2
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 1.5e-73 280.4 303 53.8
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 5.5e-73 278.5 274 57.7
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 9.4e-73 277.7 302 52.3
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 4.7e-72 275.4 211 70.6
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.4e-71 273.9 304 53.3
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.3e-71 273.1 307 52.1
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 8.8e-71 271.2 235 62.1
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 2.8e-69 266.2 307 49.8
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 4.8e-69 265.4 311 51.4
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 6.3e-69 265.0 299 50.8
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 6.3e-69 265.0 299 52.5
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.4e-68 263.8 293 51.9
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 1.6e-67 260.4 310 49.4
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 2.0e-67 260.0 296 51.7
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.3e-66 257.3 294 52.0
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 3.8e-66 255.8 309 48.9
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 1.1e-65 254.2 290 52.1
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 5.5e-65 251.9 309 48.2
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 2.7e-64 249.6 303 49.5
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.2e-62 244.2 307 49.8
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 2.6e-62 243.0 317 48.6
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 3.4e-62 242.7 305 49.2
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.4e-62 242.7 261 52.9
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 4.4e-62 242.3 195 69.7
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 7.5e-62 241.5 274 51.1
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 7.5e-62 241.5 305 48.5
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.2e-61 240.0 301 48.5
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 4.8e-61 238.8 307 47.2
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 5.9e-59 231.9 304 46.7
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.4e-55 220.7 272 51.5
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.3e-55 219.9 218 55.5
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 5.4e-52 208.8 183 60.1
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 9.2e-52 208.0 218 55.0
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.2e-51 207.6 306 43.5
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 9.5e-49 198.0 298 44.0
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 1.9e-41 173.7 245 46.5
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 1.6e-40 170.6 299 39.8
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.4e-39 167.5 239 45.2
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 6.8e-39 165.2 202 52.0
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 8.1e-32 141.7 215 43.7
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 2.4e-23 113.6 156 42.9
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 9.2e-20 101.7 82 63.4
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 1.1e-15 88.2 84 54.8
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 1.1e-09 68.2 158 32.9
Actinidia05554 Actinidia chinensis HOM05D000215 ORTHO05D007108 2.0e-06 57.4 249 28.9
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 9.9e-06 55.1 200 29.5


User provided reference genes

Program Settings