Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 2.7e-83 312.0 163 100.0
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 1.3e-80 303.1 163 96.9
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 1.4e-55 219.9 174 71.8
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.8e-55 219.5 156 75.6
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 2.3e-26 122.9 146 51.4
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 5.2e-26 121.7 147 50.3
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 4.9e-24 115.2 155 48.4
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 1.4e-23 113.6 155 47.7
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.8e-23 113.2 143 49.7
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 3.2e-23 112.5 144 51.4
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 4.1e-23 112.1 144 50.7
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 7.0e-23 111.3 143 50.3
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.2e-22 110.5 149 50.3
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 7.8e-22 107.8 157 47.8
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 7.8e-22 107.8 156 46.2
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 2.3e-21 106.3 156 44.2
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.9e-21 105.9 155 46.5
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.6e-21 104.8 155 45.8
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 2.5e-20 102.8 155 45.2
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 2.1e-19 99.8 155 43.9
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 8.0e-19 97.8 156 47.4
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.4e-18 97.1 154 40.3
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.4e-18 97.1 155 43.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 1.4e-18 97.1 158 43.7
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.8e-18 96.7 176 42.0
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.8e-18 96.7 176 42.0
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 3.1e-18 95.9 157 42.7
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 3.1e-18 95.9 159 43.4
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 8.9e-18 94.4 158 43.7
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.5e-17 93.6 153 41.8
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 5.8e-17 91.7 113 51.3
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 9.8e-17 90.9 145 41.4
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 4.9e-16 88.6 144 40.3
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 6.4e-16 88.2 157 42.7
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 1.1e-15 87.4 158 43.0
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 1.9e-15 86.7 162 40.7
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.4e-15 86.3 153 41.8
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 2.4e-15 86.3 154 38.3
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 3.2e-15 85.9 159 42.1
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 5.4e-15 85.1 153 42.5
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 7.0e-15 84.7 152 43.4
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.2e-14 84.0 157 37.6
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 2.0e-14 83.2 144 38.2
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 6.0e-14 81.6 162 40.7
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 5.0e-13 78.6 163 36.8
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 6.6e-13 78.2 154 39.0
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 8.6e-13 77.8 105 48.6
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.5e-12 77.0 105 48.6
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 1.9e-12 76.6 123 43.9
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 2.5e-12 76.3 176 35.2
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 5.6e-12 75.1 158 35.4
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 9.5e-12 74.3 154 39.0
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.6e-11 73.6 169 35.5
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 6.2e-11 71.6 155 35.5
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 8.9e-10 67.8 152 38.8
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 2.0e-09 66.6 142 38.7
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 2.6e-09 66.2 153 37.9
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 3.4e-09 65.9 168 32.7
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 5.8e-09 65.1 169 34.3
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 9.8e-09 64.3 90 41.1
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 9.8e-09 64.3 166 35.5
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 1.3e-08 63.9 151 35.8
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.7e-08 63.5 98 40.8
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 8.3e-08 61.2 104 44.2
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.1e-07 60.8 162 34.6
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.2e-06 57.4 191 29.8
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 4.6e-06 55.5 176 29.5
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 4.6e-06 55.5 154 30.5


User provided reference genes

Program Settings