Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 2.5e-152 542.0 252 100.0
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 6.0e-138 494.2 254 91.3
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 4.3e-136 488.0 252 89.3
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 8.1e-127 457.2 257 81.7
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.4e-126 456.4 251 82.9
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 5.2e-126 454.5 255 81.6
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 5.2e-126 454.5 253 81.0
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 2.0e-125 452.6 252 81.3
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 4.4e-125 451.4 255 81.6
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 7.5e-125 450.7 255 80.8
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 9.9e-125 450.3 257 81.3
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 3.7e-124 448.4 255 81.2
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 8.3e-124 447.2 253 79.1
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 8.3e-124 447.2 255 80.0
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 8.3e-124 447.2 257 79.4
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.1e-123 446.8 251 80.9
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 1.1e-123 446.8 252 80.2
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.4e-123 446.4 251 79.7
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 1.4e-123 446.4 254 78.7
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.9e-123 446.0 246 82.9
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 2.4e-123 445.7 254 80.3
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 3.2e-123 445.3 252 81.3
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 3.2e-123 445.3 251 80.5
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 3.2e-123 445.3 250 78.4
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 3.2e-123 445.3 250 80.8
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 4.1e-123 444.9 253 79.4
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 5.4e-123 444.5 238 83.2
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 5.4e-123 444.5 250 80.4
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 5.4e-123 444.5 251 80.5
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 7.1e-123 444.1 258 79.1
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 7.1e-123 444.1 253 80.2
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 7.1e-123 444.1 251 78.9
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 1.2e-122 443.4 247 80.6
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 1.2e-122 443.4 248 81.5
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 1.6e-122 443.0 248 79.8
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 1.6e-122 443.0 247 81.4
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 2.1e-122 442.6 253 79.4
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 2.1e-122 442.6 238 81.9
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 2.7e-122 442.2 234 82.5
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 3.5e-122 441.8 237 82.7
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 3.5e-122 441.8 238 82.4
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 3.5e-122 441.8 252 80.6
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 3.5e-122 441.8 255 79.2
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 6.0e-122 441.0 246 81.7
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 6.0e-122 441.0 252 79.0
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 6.0e-122 441.0 245 78.0
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 1.0e-121 440.3 250 78.0
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 1.7e-121 439.5 254 79.1
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 3.0e-121 438.7 238 81.5
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 3.9e-121 438.3 238 81.5
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 6.6e-121 437.6 253 77.5
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.5e-120 436.4 234 82.5
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.5e-120 436.4 253 77.1
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 1.9e-120 436.0 234 82.5
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.9e-120 436.0 248 78.6
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.5e-120 435.6 250 78.0
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 2.5e-120 435.6 245 79.2
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 3.3e-120 435.3 250 77.6
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 3.3e-120 435.3 253 77.9
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 4.3e-120 434.9 246 78.5
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 5.6e-120 434.5 250 77.2
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 7.3e-120 434.1 236 81.8
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 1.2e-119 433.3 250 77.6
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 1.6e-119 433.0 252 76.6
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 2.1e-119 432.6 250 77.2
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 2.1e-119 432.6 251 77.3
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 2.8e-119 432.2 249 79.9
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.8e-119 432.2 249 75.9
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 3.6e-119 431.8 245 77.1
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 4.7e-119 431.4 234 78.2
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 4.7e-119 431.4 234 81.6
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 4.7e-119 431.4 235 80.4
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 4.7e-119 431.4 235 80.0
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 4.7e-119 431.4 232 81.9
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 8.1e-119 430.6 250 78.0
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 8.1e-119 430.6 250 78.0
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 8.1e-119 430.6 246 76.0
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 8.1e-119 430.6 233 80.7
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 1.1e-118 430.3 240 78.8
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 1.1e-118 430.3 251 77.3
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 1.8e-118 429.5 250 77.6
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 2.4e-118 429.1 235 80.9
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 3.1e-118 428.7 239 78.2
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 4.0e-118 428.3 233 79.8
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 5.2e-118 427.9 250 77.6
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 5.2e-118 427.9 235 79.1
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 5.2e-118 427.9 236 80.1
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 5.2e-118 427.9 253 77.5
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 6.8e-118 427.6 246 76.8
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 6.8e-118 427.6 235 79.6
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 1.2e-117 426.8 248 76.6
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 2.6e-117 425.6 250 75.2
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 2.6e-117 425.6 240 78.3
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 3.4e-117 425.2 242 77.3
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 4.4e-117 424.9 245 78.4
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 4.4e-117 424.9 244 77.0
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 4.4e-117 424.9 248 75.8
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 5.8e-117 424.5 237 78.1
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.8e-117 424.5 252 78.2
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 5.8e-117 424.5 252 78.2
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 7.6e-117 424.1 248 76.6
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 7.6e-117 424.1 243 77.0
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 9.9e-117 423.7 250 76.8
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 9.9e-117 423.7 248 76.2
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.3e-116 423.3 232 80.2
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.7e-116 422.9 252 78.2
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.9e-116 422.2 230 80.9
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 2.9e-116 422.2 250 76.4
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 6.4e-116 421.0 232 79.7
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 6.4e-116 421.0 232 79.7
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 6.4e-116 421.0 231 79.2
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 1.1e-115 420.2 248 76.6
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.9e-115 419.5 246 75.6
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 1.9e-115 419.5 249 75.1
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 1.9e-115 419.5 251 74.5
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 2.4e-115 419.1 245 73.9
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 3.2e-115 418.7 245 75.9
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 3.2e-115 418.7 250 75.2
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 7.1e-115 417.5 248 75.8
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 1.6e-114 416.4 248 74.6
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 2.1e-114 416.0 228 78.1
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 4.6e-114 414.8 229 77.7
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 4.6e-114 414.8 248 74.6
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 6.0e-114 414.5 250 74.0
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 6.0e-114 414.5 242 75.6
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 7.8e-114 414.1 247 76.1
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 7.8e-114 414.1 250 73.6
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.0e-113 413.7 247 74.9
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 1.7e-113 412.9 243 72.8
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 2.3e-113 412.5 245 73.9
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 1.1e-112 410.2 247 72.9
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 3.3e-112 408.7 229 76.9
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 3.3e-112 408.7 244 74.6
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 9.6e-112 407.1 250 71.2
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 1.1e-110 403.7 226 81.0
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 1.4e-110 403.3 247 72.1
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 1.3e-108 396.7 242 73.6
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 8.4e-108 394.0 251 70.5
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 9.3e-107 390.6 241 73.9
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.6e-106 389.8 229 73.8
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.9e-104 382.9 228 71.5
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 4.3e-104 381.7 252 68.3
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 1.3e-103 380.2 209 83.3
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.6e-98 363.2 243 66.3
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.0e-97 360.5 238 66.8
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 1.1e-96 357.1 223 70.0
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 2.5e-96 355.9 232 68.1
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 4.3e-96 355.1 231 66.2
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 9.0e-94 347.4 245 64.5
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 2.6e-93 345.9 229 64.2
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 5.6e-88 328.2 247 61.1
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 2.2e-84 316.2 177 81.4
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 4.3e-80 302.0 156 82.1
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.8e-79 298.5 242 58.7
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.1e-78 297.4 156 82.1
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 1.7e-63 246.9 162 65.4
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 9.1e-54 214.5 232 44.8
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 5.9e-53 211.8 247 45.3
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 2.0e-45 186.8 201 48.8
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 5.2e-41 172.2 96 79.2
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 8.3e-31 138.3 107 61.7
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.4e-30 136.7 116 56.9
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 3.2e-22 109.8 63 77.8
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 5.4e-14 82.4 51 60.8
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 1.7e-12 77.4 65 60.0


User provided reference genes

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