Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 3.1e-58 228.4 129 100.0
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 3.0e-53 211.8 127 91.3
ClCG04G007660 Citrullus lanatus HOM05D007866 ORTHO05D003871 8.6e-32 140.6 129 63.6
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 5.7e-20 101.3 121 57.0
Thecc.05G029400 Theobroma cacao HOM05D007866 ORTHO05D003871 1.3e-16 90.1 115 47.8
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 2.3e-16 89.4 102 51.0
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 6.6e-16 87.8 102 51.0
Haze_20881 Corylus avellana HOM05D007866 ORTHO05D003871 8.6e-16 87.4 148 43.9
Haze_20890 Corylus avellana HOM05D007866 ORTHO05D003871 8.6e-16 87.4 148 43.9
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 4.3e-15 85.1 108 47.2
Ciclev10013493m.g Citrus clementina HOM05D007866 ORTHO05D003871 1.2e-14 83.6 93 52.7
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.2e-14 83.6 128 43.8
Duzib128G0987 Durio zibethinus HOM05D007866 ORTHO05D003871 1.6e-14 83.2 115 44.3
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 2.1e-14 82.8 124 45.2
VMungo0331G0444 Vigna mungo HOM05D007866 ORTHO05D003871 2.8e-14 82.4 107 52.3
Manes.09G098200 Manihot esculenta HOM05D007866 ORTHO05D003871 4.7e-14 81.6 104 47.1
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 6.2e-14 81.3 113 46.9
COL.COLO4_14698 Corchorus olitorius HOM05D007866 ORTHO05D003871 1.8e-13 79.7 151 40.4
Gorai.006G169200 Gossypium raimondii HOM05D007866 ORTHO05D003871 3.1e-13 79.0 144 41.7
Gohir.A09G152500 Gossypium hirsutum HOM05D007866 ORTHO05D003871 5.2e-13 78.2 144 41.0
Gohir.D09G148200 Gossypium hirsutum HOM05D007866 ORTHO05D003871 8.9e-13 77.4 143 39.9
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 8.9e-13 77.4 112 49.1
QL07p028342 Quercus lobata HOM05D007866 ORTHO05D003871 8.9e-13 77.4 114 42.1
Prupe.6G264300 Prunus persica HOM05D007866 ORTHO05D003871 1.2e-12 77.0 95 48.4
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 2.0e-12 76.3 129 41.9
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 3.4e-12 75.5 137 41.6
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 4.4e-12 75.1 104 48.1
MD12G1154500 Malus domestica HOM05D007866 ORTHO05D003871 5.8e-12 74.7 114 43.9
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 5.8e-12 74.7 142 36.6
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 5.8e-12 74.7 98 43.9
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 7.5e-12 74.3 118 44.1
Phvul.010G009300 Phaseolus vulgaris HOM05D007866 ORTHO05D003871 9.8e-12 73.9 160 36.9
Glyma.03G073100 Glycine max HOM05D007866 ORTHO05D003871 1.7e-11 73.2 167 37.7
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 1.7e-11 73.2 121 38.8
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 1.7e-11 73.2 96 46.9
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 1.7e-11 73.2 104 46.2
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 2.2e-11 72.8 124 42.7
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 2.2e-11 72.8 117 43.6
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 2.2e-11 72.8 124 42.7
Rhsim05G0199600 Rhododendron simsii HOM05D007866 ORTHO05D003871 2.2e-11 72.8 94 44.7
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 2.2e-11 72.8 114 43.0
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 2.9e-11 72.4 107 43.9
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 2.9e-11 72.4 100 46.0
DCAR_010424 Daucus carota HOM05D007866 ORTHO05D003871 4.9e-11 71.6 93 48.4
TPR.G32547 Trifolium pratense HOM05D007866 ORTHO05D003871 6.4e-11 71.2 95 50.5
Actinidia29169 Actinidia chinensis HOM05D007866 ORTHO05D003871 1.1e-10 70.5 139 41.0
Carub.0003s0839 Capsella rubella HOM05D007866 ORTHO05D003871 1.1e-10 70.5 94 45.7
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 1.1e-10 70.5 91 46.2
Potri.016G103700 Populus trichocarpa HOM05D007866 ORTHO05D003871 1.1e-10 70.5 119 41.2
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 1.4e-10 70.1 94 45.7
PGSC0003DMG400019193 Solanum tuberosum HOM05D007866 ORTHO05D003871 1.4e-10 70.1 100 46.0
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 1.9e-10 69.7 110 40.0
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 1.9e-10 69.7 92 47.8
Glyma.01G105300 Glycine max HOM05D007866 ORTHO05D003871 3.2e-10 68.9 111 45.9
ECA236G0848 Erigeron canadensis HOM05D007866 ORTHO05D003871 7.0e-10 67.8 97 45.4
AL3G20400 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 1.2e-09 67.0 93 40.9
AT3G09280 Arabidopsis thaliana HOM05D007866 ORTHO05D003871 1.2e-09 67.0 93 44.1
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.6e-09 66.6 99 43.4
BcaB04g18538 Brassica carinata HOM05D007866 ORTHO05D003871 2.7e-09 65.9 67 52.2
BcaB04g18539 Brassica carinata HOM05D007866 ORTHO05D003871 2.7e-09 65.9 67 52.2
Lsat_1_v5_gn_8_84120 Lactuca sativa HOM05D007866 ORTHO05D003871 2.7e-09 65.9 124 41.9
EL10Ac7g16230 Beta vulgaris HOM05D007866 ORTHO05D003871 3.5e-09 65.5 46 63.0
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 3.5e-09 65.5 99 44.4
Medtr4g019600 Medicago truncatula HOM05D007866 ORTHO05D003871 3.5e-09 65.5 89 49.4
Dinv35543 Davidia involucrata HOM05D007866 ORTHO05D003871 4.6e-09 65.1 87 48.3
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 4.6e-09 65.1 39 71.8
BraA03t12778Z Brassica rapa HOM05D007866 ORTHO05D003871 1.0e-08 63.9 38 71.1
Psat7g241400 Pisum sativum HOM05D007866 ORTHO05D003871 1.0e-08 63.9 92 46.7
arahy.Tifrunner.gnm1.ann1.UGPP85 Arachis hypogaea HOM05D007866 ORTHO05D003871 1.3e-08 63.5 39 74.4
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 1.7e-08 63.2 38 71.1
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 1.7e-08 63.2 68 50.0
Nn2g11287 Nelumbo nucifera HOM05D007156 ORTHO05D003871 2.3e-08 62.8 75 38.7
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 3.9e-08 62.0 77 49.4
PGR031G1324 Punica granatum HOM05D007866 ORTHO05D003871 3.9e-08 62.0 119 37.8
Sp3g07650 Schrenkiella parvula HOM05D007866 ORTHO05D003871 3.9e-08 62.0 38 68.4
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 8.6e-08 60.8 105 39.0
TAR633G1409 Trochodendron aralioides HOM05D007866 ORTHO05D003871 8.6e-08 60.8 87 46.0
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 1.1e-07 60.5 63 49.2
DCAR_012139 Daucus carota HOM05D007866 ORTHO05D003871 2.5e-07 59.3 108 40.7
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.5e-07 59.3 85 42.4
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.5e-07 59.3 85 42.4
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 7.3e-07 57.8 85 40.0
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 7.3e-07 57.8 85 40.0
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 9.5e-07 57.4 75 44.0
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 1.2e-06 57.0 54 53.7
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.2e-06 57.0 46 54.3
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.6e-06 56.6 56 53.6
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 2.1e-06 56.2 75 41.3
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 2.1e-06 56.2 81 43.2
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 2.1e-06 56.2 49 53.1
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 2.1e-06 56.2 41 58.5
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 2.1e-06 56.2 49 53.1
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 2.8e-06 55.8 76 43.4
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 2.8e-06 55.8 86 39.5
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 2.8e-06 55.8 41 56.1
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 2.8e-06 55.8 56 51.8
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.7e-06 55.1 68 42.6
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 4.7e-06 55.1 94 37.2
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 6.2e-06 54.7 87 36.8
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 6.2e-06 54.7 43 55.8
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.2e-06 54.7 43 55.8
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.2e-06 54.7 43 55.8
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.2e-06 54.7 43 55.8
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.2e-06 54.7 43 55.8
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 6.2e-06 54.7 74 41.9
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 6.2e-06 54.7 38 63.2
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 6.2e-06 54.7 125 36.8
Dinv18957 Davidia involucrata HOM05D007156 ORTHO05D003871 8.1e-06 54.3 65 49.2
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 8.1e-06 54.3 93 36.6
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 8.1e-06 54.3 36 61.1


User provided reference genes

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