Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 6.0e-91 337.4 163 100.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 8.7e-82 307.0 162 91.4
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.8e-80 302.0 167 88.0
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.3e-72 276.6 165 78.8
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.0e-53 213.8 156 65.4
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 6.5e-53 211.1 163 63.2
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 2.1e-51 206.1 161 60.2
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.7e-51 205.7 158 59.5
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 3.6e-51 205.3 166 62.0
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 3.6e-51 205.3 154 63.6
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.7e-51 204.9 150 62.7
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 4.7e-51 204.9 152 63.2
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 6.1e-51 204.5 166 60.2
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.0e-50 203.8 154 62.3
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.4e-50 203.4 155 61.3
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 159 59.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.8e-50 203.0 153 62.7
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.3e-50 202.6 155 60.0
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 3.0e-50 202.2 156 62.2
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 6.7e-50 201.1 166 60.8
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 8.8e-50 200.7 152 60.5
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.8e-50 200.7 164 60.4
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 8.8e-50 200.7 169 60.4
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.1e-49 200.3 155 61.9
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.1e-49 200.3 155 61.9
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.0e-49 199.5 165 58.8
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.3e-49 198.7 141 63.1
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 4.4e-49 198.4 169 58.0
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 4.4e-49 198.4 155 61.9
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 5.7e-49 198.0 157 61.1
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 5.7e-49 198.0 169 58.0
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 7.4e-49 197.6 172 55.8
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 9.7e-49 197.2 159 59.1
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 9.7e-49 197.2 163 58.3
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.3e-48 196.8 163 58.3
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.7e-48 196.4 138 63.8
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.7e-48 196.4 163 58.3
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.7e-48 196.4 134 65.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 2.2e-48 196.1 167 55.7
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.8e-48 195.7 137 65.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.8e-48 195.7 169 55.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 2.8e-48 195.7 168 56.0
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 3.7e-48 195.3 166 56.6
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 3.7e-48 195.3 131 66.4
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 3.7e-48 195.3 129 66.7
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 6.3e-48 194.5 162 58.0
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 6.3e-48 194.5 155 56.8
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 8.2e-48 194.1 170 55.9
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.1e-47 193.7 170 56.5
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.1e-47 193.7 146 61.6
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-47 193.7 148 62.2
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.4e-47 193.4 146 61.6
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.4e-47 193.4 167 56.9
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.4e-47 193.4 168 55.4
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.8e-47 193.0 133 64.7
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.8e-47 193.0 129 65.9
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.4e-47 192.6 169 54.4
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 2.4e-47 192.6 161 55.3
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.4e-47 192.6 157 56.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 3.1e-47 192.2 168 56.0
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 4.1e-47 191.8 160 57.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 5.3e-47 191.4 168 54.8
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 9.1e-47 190.7 129 66.7
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 9.1e-47 190.7 146 61.0
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 1.2e-46 190.3 132 64.4
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.0e-46 189.5 156 59.0
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 2.0e-46 189.5 119 71.4
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.5e-46 188.3 142 59.2
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 5.9e-46 188.0 154 59.7
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 5.9e-46 188.0 118 68.6
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 7.7e-46 187.6 176 50.6
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.7e-45 186.4 168 53.6
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 1.6e-43 179.9 167 53.3
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 8.0e-43 177.6 152 53.9
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.8e-42 176.4 168 53.0
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.5e-41 173.3 136 59.6
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 3.4e-41 172.2 154 51.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 9.7e-41 170.6 128 59.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 9.7e-41 170.6 160 52.5
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.2e-40 169.5 140 56.4
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 1.4e-39 166.8 143 56.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 7.7e-38 161.0 124 60.5
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 6.1e-35 151.4 108 59.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.4e-34 150.2 169 49.1
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 3.0e-34 149.1 150 49.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.3e-32 143.7 150 48.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 2.2e-32 142.9 150 44.0
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.8e-32 142.5 117 53.8
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 6.3e-32 141.4 161 47.2
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 5.4e-31 138.3 161 46.6
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 5.4e-31 138.3 166 45.8
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 7.0e-31 137.9 163 46.6
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 7.7e-30 134.4 158 41.8
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 1.7e-29 133.3 87 69.0
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.4e-26 123.6 78 66.7
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-24 117.1 87 58.6
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.9e-16 88.6 77 53.2
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.3e-13 79.7 63 60.3
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 3.9e-13 79.0 72 52.8
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.1e-12 77.4 49 69.4
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 8.0e-11 71.2 126 28.6


User provided reference genes

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