Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 9.6e-59 229.9 116 100.0
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.7e-42 176.0 112 83.0
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 6.3e-42 174.1 107 82.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.1e-33 145.2 106 70.8
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 1.8e-28 129.4 112 66.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 6.1e-13 77.8 97 49.5
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.0e-11 72.8 105 44.8
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 2.0e-11 72.8 101 40.6
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.2e-10 69.3 106 42.5
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 2.8e-10 68.9 115 40.0
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.8e-10 68.2 109 44.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 4.8e-10 68.2 98 44.9
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 8.3e-10 67.4 96 43.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 8.3e-10 67.4 107 42.1
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 1.1e-09 67.0 99 41.4
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.4e-09 66.6 108 41.7
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.4e-09 66.6 110 39.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 3.1e-09 65.5 108 39.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 3.1e-09 65.5 110 38.2
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 4.1e-09 65.1 97 46.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.1e-09 63.9 109 40.4
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.2e-08 63.5 100 44.0
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.2e-08 63.5 108 39.8
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.2e-08 63.5 109 40.4
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.2e-08 63.5 106 45.3
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 2.0e-08 62.8 106 41.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 2.0e-08 62.8 99 40.4
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 2.7e-08 62.4 109 39.4
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.5e-08 62.0 110 39.1
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.5e-08 62.0 106 42.5
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.9e-08 61.2 92 41.3
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 7.7e-08 60.8 95 47.4
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.3e-07 60.1 97 41.2
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.3e-07 60.1 90 46.7
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.7e-07 59.7 98 39.8
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.7e-07 59.7 102 39.2
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 1.7e-07 59.7 111 38.7
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 2.3e-07 59.3 98 39.8
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.3e-07 59.3 98 43.9
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 2.3e-07 59.3 104 41.3
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.3e-07 59.3 114 38.6
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.8e-07 58.5 91 42.9
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 5.0e-07 58.2 105 38.1
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.0e-07 58.2 106 36.8
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 5.0e-07 58.2 90 44.4
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 6.6e-07 57.8 100 47.0
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 8.6e-07 57.4 111 45.0
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.1e-06 57.0 106 38.7
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.1e-06 57.0 107 40.2
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.5e-06 55.8 106 38.7
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.5e-06 55.8 110 33.6
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 5.5e-06 54.7 97 36.1
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 9.5e-06 53.9 101 39.6


User provided reference genes

Program Settings