Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 5.6e-116 421.0 220 100.0
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 8.6e-109 397.1 220 91.4
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 2.4e-106 389.0 217 90.8
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 4.6e-94 348.2 222 77.5
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 8.4e-88 327.4 218 72.0
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 5.1e-85 318.2 220 70.9
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.9e-84 316.2 220 70.9
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 9.6e-84 313.9 218 69.3
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 9.6e-84 313.9 224 71.4
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.3e-83 313.5 224 69.6
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.6e-83 313.2 230 69.1
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 3.7e-83 312.0 218 68.3
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 6.2e-83 311.2 218 68.8
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 6.2e-83 311.2 223 70.0
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.1e-82 310.5 226 69.0
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.4e-82 309.3 226 69.0
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 2.4e-82 309.3 228 68.9
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 2.4e-82 309.3 218 68.3
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 3.1e-82 308.9 218 71.6
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 4.0e-82 308.5 217 68.7
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 5.3e-82 308.1 218 69.3
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 6.9e-82 307.8 221 72.4
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 6.9e-82 307.8 219 70.3
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 1.2e-81 307.0 218 68.3
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 3.4e-81 305.4 218 67.4
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 5.8e-81 304.7 227 70.5
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.3e-80 303.5 223 68.6
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.3e-80 303.5 217 69.6
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 1.7e-80 303.1 218 67.9
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 2.9e-80 302.4 222 67.1
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 2.9e-80 302.4 217 68.2
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 4.9e-80 301.6 218 65.6
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 4.9e-80 301.6 216 69.4
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 4.9e-80 301.6 225 68.9
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 6.5e-80 301.2 216 69.0
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 8.4e-80 300.8 216 69.4
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 8.4e-80 300.8 218 68.3
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 1.1e-79 300.4 220 66.8
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 1.4e-79 300.1 217 65.9
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 1.4e-79 300.1 218 68.8
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.9e-79 299.7 217 68.7
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.9e-79 299.7 217 68.2
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 2.5e-79 299.3 217 66.8
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 2.5e-79 299.3 220 66.4
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 2.5e-79 299.3 220 66.4
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 2.5e-79 299.3 215 69.3
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 3.2e-79 298.9 218 65.6
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 3.2e-79 298.9 220 67.3
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 3.2e-79 298.9 219 73.1
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 4.2e-79 298.5 218 66.1
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 7.1e-79 297.7 220 66.8
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 7.1e-79 297.7 219 66.2
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 9.3e-79 297.4 217 66.8
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.2e-78 297.0 222 66.7
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 1.2e-78 297.0 218 66.1
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 1.2e-78 297.0 215 68.4
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.2e-78 297.0 218 67.9
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.6e-78 296.6 218 67.0
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 1.6e-78 296.6 222 66.2
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 2.1e-78 296.2 217 66.8
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 2.7e-78 295.8 225 66.7
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.7e-78 295.8 216 68.1
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 3.5e-78 295.4 218 67.9
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 3.5e-78 295.4 216 68.5
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 3.5e-78 295.4 221 67.4
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 4.6e-78 295.0 218 64.7
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 6.0e-78 294.7 248 62.5
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 6.0e-78 294.7 223 66.8
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 6.0e-78 294.7 211 70.6
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 6.0e-78 294.7 225 67.6
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 6.0e-78 294.7 237 63.3
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 3.9e-77 292.0 219 66.2
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 3.9e-77 292.0 212 69.8
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.1e-77 291.6 228 66.2
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 2.5e-76 289.3 218 63.3
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 3.3e-76 288.9 229 65.5
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 3.3e-76 288.9 217 66.4
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 4.3e-76 288.5 221 64.7
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.1e-75 286.2 222 64.0
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 2.8e-75 285.8 225 66.2
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.7e-75 285.4 222 64.0
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.4e-74 283.5 252 60.3
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 2.4e-74 282.7 261 56.3
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.5e-73 280.0 221 62.9
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 7.6e-73 277.7 222 60.8
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 1.0e-72 277.3 248 60.1
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.3e-72 276.9 222 61.7
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 2.2e-72 276.2 224 61.2
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 6.5e-72 274.6 231 61.5
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.1e-71 273.9 222 61.3
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 1.1e-71 273.9 222 61.3
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 1.9e-71 273.1 222 60.4
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 2.5e-71 272.7 219 61.2
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 3.2e-71 272.3 225 59.6
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 5.5e-71 271.6 225 66.7
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 7.2e-71 271.2 222 59.5
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 2.1e-70 269.6 217 58.5
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.7e-70 269.2 215 65.1
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 2.7e-70 269.2 257 59.1
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 3.6e-70 268.9 221 59.3
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 3.6e-70 268.9 221 59.3
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 1.8e-69 266.5 220 58.6
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 1.8e-69 266.5 220 58.6
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 1.8e-69 266.5 220 59.5
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 3.0e-69 265.8 177 71.2
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 3.0e-69 265.8 219 59.4
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 3.3e-68 262.3 211 63.5
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 4.3e-68 261.9 160 77.5
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 9.7e-68 260.8 220 61.4
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 9.7e-68 260.8 216 63.0
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.8e-67 259.2 159 77.4
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 6.9e-66 254.6 198 63.1
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.2e-62 243.8 188 66.5
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 5.7e-60 235.0 218 54.6
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 3.7e-59 232.3 217 54.8
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 1.0e-56 224.2 191 64.9
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 6.1e-54 214.9 132 73.5
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 1.0e-53 214.2 232 50.0
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 1.4e-53 213.8 121 81.0
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.0e-49 199.9 221 51.6
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 2.9e-48 196.1 113 80.5
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.6e-46 190.3 251 43.4
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 2.1e-46 189.9 245 45.3
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 4.7e-46 188.7 210 48.1
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 4.2e-39 165.6 171 48.5
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 2.8e-35 152.9 100 71.0
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 4.8e-35 152.1 251 36.3
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 9.5e-31 137.9 178 45.5
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 4.5e-25 119.0 221 39.8
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 3.1e-13 79.7 42 83.3
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 3.2e-10 69.7 65 55.4
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 4.6e-09 65.9 87 43.7
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 7.8e-09 65.1 36 75.0
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 1.0e-08 64.7 214 27.1
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 3.9e-08 62.8 43 72.1
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 5.6e-07 58.9 41 70.7


User provided reference genes

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