Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 5.4e-190 667.5 345 100.0
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.3e-154 550.1 426 70.9
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 4.6e-149 531.6 357 79.0
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 1.9e-147 526.2 284 96.5
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 2.9e-103 379.4 348 62.1
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 3.8e-103 379.0 359 60.4
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 7.2e-102 374.8 363 60.1
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 1.6e-101 373.6 360 58.3
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 1.2e-99 367.5 360 58.9
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.3e-99 365.9 359 57.9
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 2.8e-98 362.8 363 57.6
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 4.8e-98 362.1 351 58.1
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 1.2e-96 357.5 358 56.4
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 1.6e-96 357.1 349 56.4
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 3.5e-96 355.9 357 56.6
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 3.5e-96 355.9 354 59.9
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 4.5e-96 355.5 357 56.6
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 5.9e-96 355.1 359 58.5
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 1.3e-95 354.0 354 59.3
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 6.5e-95 351.7 335 58.8
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 8.5e-95 351.3 360 54.4
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 1.1e-94 350.9 351 57.0
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 4.2e-94 349.0 353 56.9
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 4.2e-94 349.0 353 56.9
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.2e-93 347.4 362 56.6
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 1.6e-93 347.1 345 57.4
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 1.4e-92 344.0 360 54.7
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 6.8e-92 341.7 357 55.5
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 1.2e-91 340.9 357 56.9
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 2.0e-91 340.1 356 53.9
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.6e-91 339.7 342 56.4
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 1.3e-90 337.4 353 53.0
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 1.7e-90 337.0 358 55.0
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 1.1e-89 334.3 352 55.4
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 7.0e-89 331.6 355 55.2
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 9.1e-89 331.3 340 56.8
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 1.6e-88 330.5 362 52.2
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 1.6e-88 330.5 346 54.0
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 4.5e-88 328.9 346 53.8
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 3.8e-87 325.9 323 57.0
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 1.1e-86 324.3 340 53.8
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 1.5e-86 323.9 357 52.9
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 3.2e-86 322.8 351 53.0
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 8.0e-85 318.2 351 55.6
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 1.0e-84 317.8 339 52.5
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 3.0e-84 316.2 342 55.0
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 3.0e-84 316.2 356 51.7
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 4.0e-84 315.8 303 60.7
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 5.2e-84 315.5 363 51.0
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.2e-83 314.3 400 49.0
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 7.5e-83 311.6 450 46.4
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 1.8e-81 307.0 351 51.9
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 1.8e-81 307.0 360 50.3
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 1.6e-80 303.9 391 47.3
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 4.5e-80 302.4 313 55.6
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 2.3e-79 300.1 335 52.2
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 2.9e-79 299.7 344 50.3
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 1.9e-78 297.0 329 51.4
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 1.9e-78 297.0 357 50.4
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 2.5e-78 296.6 351 51.0
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 9.5e-78 294.7 352 51.1
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 6.1e-77 292.0 343 50.4
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 1.8e-76 290.4 397 49.4
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 1.8e-76 290.4 337 52.5
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 4.4e-75 285.8 283 56.9
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 1.7e-74 283.9 350 47.7
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 2.9e-74 283.1 244 64.8
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 2.9e-74 283.1 357 49.6
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 3.7e-74 282.7 353 49.3
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 6.4e-74 282.0 364 49.2
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 2.4e-73 280.0 297 53.9
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 3.2e-73 279.6 349 49.0
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 5.4e-73 278.9 345 47.2
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 5.4e-73 278.9 333 51.4
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 7.0e-73 278.5 351 49.3
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 1.6e-72 277.3 294 57.1
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 2.0e-72 276.9 414 43.7
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 2.0e-72 276.9 414 43.7
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 3.5e-72 276.2 349 45.8
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 5.9e-72 275.4 349 46.4
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 5.9e-72 275.4 365 47.7
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 7.8e-72 275.0 348 46.6
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 7.8e-72 275.0 359 45.4
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 1.3e-71 274.2 343 46.6
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 1.7e-71 273.9 360 44.4
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 2.3e-71 273.5 351 45.9
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 3.9e-71 272.7 351 47.9
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 2.5e-70 270.0 309 52.1
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 4.3e-70 269.2 358 45.5
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 9.5e-70 268.1 251 60.2
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 4.7e-69 265.8 364 47.5
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 4.7e-69 265.8 331 47.4
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 4.7e-69 265.8 358 43.3
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 1.1e-68 264.6 365 44.1
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 1.1e-68 264.6 359 44.8
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 5.2e-68 262.3 349 48.1
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 8.9e-68 261.5 348 44.3
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 8.9e-68 261.5 348 44.3
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 4.4e-67 259.2 348 44.0
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 4.4e-67 259.2 350 48.0
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 7.5e-67 258.5 344 47.1
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 1.3e-66 257.7 352 44.0
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 1.1e-65 254.6 358 43.0
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 1.1e-65 254.6 359 42.3
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 1.9e-65 253.8 348 43.7
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.9e-65 253.8 349 45.8
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 5.4e-65 252.3 359 42.3
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 5.4e-65 252.3 347 43.8
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 7.8e-64 248.4 341 46.3
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 2.5e-62 243.4 347 42.4
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 3.3e-62 243.0 268 54.1
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 3.3e-62 243.0 349 44.7
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 7.3e-62 241.9 355 42.0
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 2.8e-61 240.0 320 50.3
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 8.1e-61 238.4 330 47.6
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 1.1e-60 238.0 382 39.8
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 4.0e-60 236.1 349 43.0
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 3.4e-59 233.0 299 46.2
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 4.9e-58 229.2 288 50.7
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 6.4e-58 228.8 351 40.7
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 7.1e-57 225.3 289 45.7
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 6.0e-56 222.2 318 44.0
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 2.3e-55 220.3 387 37.5
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 3.9e-55 219.5 303 49.2
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 2.8e-53 213.4 316 42.4
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 6.2e-53 212.2 264 50.8
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 2.0e-51 207.2 281 45.2
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 7.6e-51 205.3 306 43.1
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 2.9e-50 203.4 257 50.6
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 3.8e-50 203.0 344 40.4
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 6.4e-50 202.2 303 44.6
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 9.2e-49 198.4 269 48.0
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.6e-48 197.6 200 54.0
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 1.6e-48 197.6 346 40.8
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.0e-47 194.9 349 39.3
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.9e-47 193.0 348 42.0
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 1.2e-43 181.4 135 67.4
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 3.2e-41 173.3 170 58.2
COL.COLO4_06072 Corchorus olitorius HOM05D004223 ORTHO05D004792 7.8e-40 168.7 181 54.7
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 3.1e-36 156.8 139 62.6
Eucgr.A02011 Eucalyptus grandis HOM05D004223 ORTHO05D004792 2.0e-35 154.1 264 41.7
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 2.0e-35 154.1 412 33.5
Ca_18272_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 5.8e-35 152.5 186 48.9
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 7.6e-35 152.1 178 50.6
Atru.chr10.1339 Acer truncatum HOM05D004223 ORTHO05D004792 1.3e-34 151.4 160 51.9
Duzib138G1261 Durio zibethinus HOM05D004223 ORTHO05D004792 9.3e-33 145.2 351 34.2
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 7.9e-32 142.1 138 58.7
Oeu040112.1 Olea europaea HOM05D004223 ORTHO05D004792 4.3e-30 136.3 102 62.7
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 1.4e-28 131.3 343 31.5
unitig_37.g12105 Utricularia gibba HOM05D004223 ORTHO05D004792 2.2e-26 124.0 149 48.3
Oeu040113.1 Olea europaea HOM05D004223 ORTHO05D004792 1.9e-25 120.9 140 50.7
MBI10_g27412_MAGBIO Magnolia biondii HOM05D004223 ORTHO05D004792 1.2e-24 118.2 350 31.4
Haze_05551 Corylus avellana HOM05D004223 ORTHO05D004792 6.7e-23 112.5 113 54.9
CSS0012222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 4.3e-22 109.8 125 55.2
SMO174G0155 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 1.3e-21 108.2 221 37.1
Actinidia22925 Actinidia chinensis HOM05D004223 ORTHO05D004792 2.8e-21 107.1 77 68.8
CDE02G0113 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 5.5e-17 92.8 118 44.9
Haze_13521 Corylus avellana HOM05D004223 ORTHO05D004792 5.5e-17 92.8 104 47.1
TPR.G14049 Trifolium pratense HOM05D004223 ORTHO05D004792 7.9e-16 89.0 108 46.3
CSS0013327 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 3.0e-15 87.0 95 60.0
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 6.7e-15 85.9 275 32.4
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 1.3e-13 81.6 93 48.4
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 1.2e-11 75.1 85 56.5
Dinv05252 Davidia involucrata HOM05D004223 ORTHO05D004792 3.8e-10 70.1 53 71.7
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 4.2e-09 66.6 86 53.5
vmacro10943 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 5.5e-09 66.2 45 71.1
CSS0014222 Camellia sinensis var. sinensis HOM05D004223 ORTHO05D004792 1.6e-08 64.7 58 69.0
EL10Ac4g07847 Beta vulgaris HOM05D001248 ORTHO05D001183 1.8e-07 61.2 298 24.5
Sed0009700 Sechium edule HOM05D004223 ORTHO05D372866 1.8e-07 61.2 87 47.1
Pp3c2_8490 Physcomitrium patens HOM05D001248 ORTHO05D001183 3.0e-07 60.5 295 28.1
Ah.06g185670 Amaranthus hybridus HOM05D001248 ORTHO05D001183 6.7e-07 59.3 295 24.7
Pp3c1_42710 Physcomitrium patens HOM05D001248 ORTHO05D001183 4.3e-06 56.6 296 27.4


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