Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002673.2 Cucumis melo HOM05D025345 ORTHO05D010797 1.3e-79 299.7 148 100.0
CsaV3_1G033130 Cucumis sativus L. HOM05D025345 ORTHO05D010797 1.4e-70 269.6 148 90.5
ClCG03G007490 Citrullus lanatus HOM05D025345 ORTHO05D010797 4.1e-38 161.8 163 57.1
Sed0014101 Sechium edule HOM05D025345 ORTHO05D010797 5.6e-35 151.4 158 57.6
Sed0025771 Sechium edule HOM05D025345 ORTHO05D010797 4.1e-30 135.2 163 53.4
Manes.16G042200 Manihot esculenta HOM05D008894 ORTHO05D010797 4.9e-15 85.1 173 34.1
Haze_06185 Corylus avellana HOM05D008894 ORTHO05D010797 8.3e-15 84.3 167 37.1
Cfa000643 Carpinus fangiana HOM05D008894 ORTHO05D010797 3.2e-14 82.4 163 36.2
RcHm_v2.0_Chr5g0011501 Rosa chinensis HOM05D008894 ORTHO05D010797 3.5e-13 79.0 179 35.2
Glyma.05G160200 Glycine max HOM05D008894 ORTHO05D010797 1.5e-11 73.6 167 34.1
QL05p048742 Quercus lobata HOM05D000052 ORTHO05D037437 1.5e-11 73.6 189 30.7
Dinv32345 Davidia involucrata HOM05D001501 ORTHO05D001329 1.9e-11 73.2 187 32.6
Cpa.g.sc7.96 Carica papaya HOM05D008894 ORTHO05D010797 3.6e-10 68.9 154 36.4
CiPaw.09G072300 Carya illinoinensis HOM05D008894 ORTHO05D010797 1.1e-09 67.4 197 30.5
FAN25G2059 Fragaria x ananassa HOM05D008894 ORTHO05D010797 6.8e-09 64.7 179 31.3
TAR627G0474 Trochodendron aralioides HOM05D008894 ORTHO05D010797 3.4e-08 62.4 193 31.1
COL.COLO4_31250 Corchorus olitorius HOM05D008894 ORTHO05D010797 4.4e-08 62.0 185 31.4
FAN16G0296 Fragaria x ananassa HOM05D008894 ORTHO05D010797 4.4e-08 62.0 179 32.4
FAN21G1154 Fragaria x ananassa HOM05D008894 ORTHO05D010797 5.8e-08 61.6 175 32.6
Glyma.08G117800 Glycine max HOM05D008894 ORTHO05D010797 5.8e-08 61.6 169 32.5
Phvul.002G240500 Phaseolus vulgaris HOM05D008894 ORTHO05D010797 2.2e-07 59.7 167 28.1
Sabra11G0053900 Salix brachista HOM05D008894 ORTHO05D010797 2.9e-07 59.3 154 28.6
Eucgr.E02770 Eucalyptus grandis HOM05D042577 ORTHO05D010797 8.4e-07 57.8 205 30.2
Sabra11G0057400 Salix brachista HOM05D008894 ORTHO05D010797 1.4e-06 57.0 153 27.5
Prupe.4G065900 Prunus persica HOM05D008894 ORTHO05D010797 2.4e-06 56.2 177 28.8
DCAR_005185 Daucus carota HOM05D008894 ORTHO05D010797 3.2e-06 55.8 169 31.4
FvH4_3g07390 Fragaria vesca HOM05D008894 ORTHO05D010797 5.4e-06 55.1 178 29.2
Gohir.D06G138200 Gossypium hirsutum HOM05D008894 ORTHO05D010797 5.4e-06 55.1 160 28.8
Potri.004G059700 Populus trichocarpa HOM05D008894 ORTHO05D010797 7.1e-06 54.7 186 28.5
FAN11G1692 Fragaria x ananassa HOM05D008894 ORTHO05D010797 9.2e-06 54.3 178 29.2


User provided reference genes

Program Settings