Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 4.6e-39 164.1 83 100.0
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.3e-38 161.8 83 97.6
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 3.3e-37 157.9 83 94.0
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 8.5e-33 143.3 82 82.9
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 2.5e-32 141.7 80 85.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 9.4e-32 139.8 80 82.5
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.2e-31 139.4 83 81.9
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.2e-31 139.4 83 81.9
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.2e-31 139.4 80 82.5
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.6e-31 139.0 83 81.9
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 2.7e-31 138.3 80 81.2
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 2.7e-31 138.3 80 83.8
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 81.2
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 81.2
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 81.2
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 81.2
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 3.6e-31 137.9 80 85.0
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 6.1e-31 137.1 81 80.2
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 7.9e-31 136.7 81 81.5
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 7.9e-31 136.7 80 80.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.0e-30 136.3 80 82.5
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 2.3e-30 135.2 77 84.4
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.9e-30 134.4 81 79.0
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 5.1e-30 134.0 83 79.5
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.1e-30 134.0 83 79.5
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.1e-30 134.0 83 79.5
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 5.1e-30 134.0 83 79.5
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 5.1e-30 134.0 82 79.3
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.7e-30 133.7 83 79.5
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.7e-30 133.7 83 79.5
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 6.7e-30 133.7 80 78.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 8.8e-30 133.3 83 78.3
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 8.8e-30 133.3 83 78.3
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.1e-29 132.9 83 81.9
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 1.5e-29 132.5 83 78.3
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.6e-29 131.7 83 78.3
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 2.6e-29 131.7 81 79.0
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 2.6e-29 131.7 81 77.8
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 3.3e-29 131.3 83 77.1
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 3.3e-29 131.3 81 77.8
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 9.7e-29 129.8 82 75.6
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 9.7e-29 129.8 83 75.9
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 9.7e-29 129.8 83 78.3
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.7e-28 129.0 83 73.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 2.2e-28 128.6 70 92.9
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.2e-28 128.6 70 92.9
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 2.8e-28 128.3 80 76.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 3.7e-28 127.9 79 78.5
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 4.8e-28 127.5 76 85.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 6.3e-28 127.1 82 74.4
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 1.1e-27 126.3 81 75.3
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.4e-27 125.2 77 81.8
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 4.1e-27 124.4 77 81.8
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 5.3e-27 124.0 77 81.8
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 9.1e-27 123.2 93 67.7
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.6e-26 122.5 76 80.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 2.2e-25 118.6 76 77.6
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 8.5e-25 116.7 76 76.3
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 8.5e-25 116.7 76 76.3
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 8.5e-25 116.7 80 67.5
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.5e-24 115.9 75 77.3
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.5e-24 115.9 80 71.2
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-24 115.9 77 70.1
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 1.9e-24 115.5 76 76.3
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.9e-24 115.5 69 82.6
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 3.2e-24 114.8 76 76.3
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 3.2e-24 114.8 76 76.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 4.2e-24 114.4 76 76.3
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 5.5e-24 114.0 76 75.0
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 5.5e-24 114.0 71 77.5
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.5e-24 114.0 76 76.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 5.5e-24 114.0 76 76.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 7.2e-24 113.6 68 85.3
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 7.2e-24 113.6 76 76.3
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 7.2e-24 113.6 76 76.3
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.2e-23 112.8 71 80.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.2e-23 112.8 76 72.4
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 1.6e-23 112.5 71 80.3
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.6e-23 112.5 77 71.4
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 3.6e-23 111.3 77 72.7
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.6e-23 111.3 69 76.8
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 77 70.1
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 3.0e-22 108.2 76 72.4
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 4.0e-22 107.8 68 77.9
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 4.0e-22 107.8 83 66.3
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 4.0e-22 107.8 67 80.6
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 5.2e-22 107.5 77 68.8
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 6.7e-22 107.1 68 80.9
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.5e-21 105.9 151 43.0
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 2.0e-21 105.5 67 80.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 4.4e-21 104.4 76 69.7
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 9.7e-21 103.2 69 76.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.3e-20 102.8 71 73.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.7e-20 101.3 99 58.6
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 8.2e-20 100.1 58 86.2
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.1e-19 99.8 55 89.1
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 3.1e-19 98.2 74 64.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.2e-18 96.3 95 57.9
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.5e-18 94.4 75 62.7
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 2.9e-17 91.7 122 46.7
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.9e-16 89.0 61 72.1
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 9.4e-16 86.7 60 73.3
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.2e-15 86.3 65 67.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.6e-15 85.9 52 84.6
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.6e-15 85.9 55 83.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 4.7e-15 84.3 68 61.8
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 8.0e-15 83.6 52 82.7
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.0e-15 83.6 72 56.9
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 3.0e-14 81.6 78 59.0
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.6e-13 78.6 69 63.8
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 9.8e-13 76.6 61 65.6
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 9.8e-13 76.6 62 66.1
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.3e-12 76.3 59 71.2
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.3e-12 76.3 78 47.4
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 4.2e-08 61.2 35 88.6
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 9.4e-08 60.1 39 82.1
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 2.3e-06 55.5 34 85.3
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 8.8e-06 53.5 54 53.7


User provided reference genes

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