Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 1.6e-67 259.2 127 100.0
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 8.9e-66 253.4 127 97.6
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 7.5e-65 250.4 127 94.5
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 1.5e-60 236.1 127 87.4
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 2.1e-54 215.7 124 83.9
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.1e-52 209.9 126 78.6
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 5.6e-52 207.6 126 79.4
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 5.6e-52 207.6 126 79.4
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 7.3e-52 207.2 126 77.0
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 7.3e-52 207.2 126 77.0
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 7.3e-52 207.2 124 76.6
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 1.2e-51 206.5 127 75.6
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.2e-51 206.5 125 77.6
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.2e-51 206.5 125 77.6
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.2e-51 206.5 126 78.6
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.6e-51 206.1 124 78.2
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 1.6e-51 206.1 124 78.2
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 2.8e-51 205.3 127 78.0
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 2.8e-51 205.3 125 78.4
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 2.8e-51 205.3 126 76.2
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 4.7e-51 204.5 129 76.0
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 4.7e-51 204.5 123 77.2
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 1.1e-50 203.4 129 79.1
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.1e-50 203.4 126 77.0
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.1e-50 203.4 124 75.8
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.8e-50 202.6 126 75.4
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 1.8e-50 202.6 127 76.4
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 3.1e-50 201.8 124 75.8
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 4.0e-50 201.4 128 74.2
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 5.2e-50 201.1 124 75.0
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 9.0e-50 200.3 121 74.4
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 2.0e-49 199.1 127 74.8
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 75.0
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 4.4e-49 198.0 127 74.0
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 5.8e-49 197.6 126 73.8
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 5.8e-49 197.6 124 73.4
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 7.6e-49 197.2 127 74.0
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 7.6e-49 197.2 126 73.0
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 1.7e-48 196.1 126 75.4
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 2.2e-48 195.7 129 76.7
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 3.8e-48 194.9 125 73.6
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 3.8e-48 194.9 127 74.0
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 4.9e-48 194.5 128 75.0
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 6.4e-48 194.1 129 74.4
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 6.4e-48 194.1 124 73.4
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 8.4e-48 193.7 123 75.6
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-47 192.6 127 72.4
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 1.9e-47 192.6 127 73.2
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.9e-47 192.6 127 73.2
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 2.4e-47 192.2 122 75.4
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 2.4e-47 192.2 127 72.4
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 3.2e-47 191.8 127 73.2
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 7.1e-47 190.7 124 75.0
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 2.7e-46 188.7 127 68.5
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 4.6e-46 188.0 122 73.0
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 4.6e-46 188.0 125 71.2
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 6.0e-46 187.6 127 70.1
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 6.0e-46 187.6 122 72.1
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 7.8e-46 187.2 127 70.1
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 1.0e-45 186.8 127 69.3
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 1.3e-45 186.4 124 71.0
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 1.7e-45 186.0 124 71.0
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 2.3e-45 185.7 127 70.1
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 3.9e-45 184.9 121 71.1
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 5.1e-45 184.5 126 70.6
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 5.1e-45 184.5 124 70.2
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 6.6e-45 184.1 127 67.7
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 1.1e-44 183.3 124 71.8
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-44 183.3 127 68.5
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 1.1e-44 183.3 126 69.8
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.5e-44 183.0 125 68.8
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.5e-44 183.0 125 68.8
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 68.0
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 68.0
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-44 182.6 128 69.5
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 1.9e-44 182.6 127 67.7
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 2.5e-44 182.2 128 68.8
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 3.3e-44 181.8 126 68.3
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 4.3e-44 181.4 125 68.0
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 4.3e-44 181.4 121 72.7
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 7.3e-44 180.6 130 65.4
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 9.6e-44 180.3 128 67.2
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.6e-43 179.5 126 68.3
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 2.1e-43 179.1 124 66.9
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 2.8e-43 178.7 128 69.5
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 2.8e-43 178.7 128 65.6
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 3.6e-43 178.3 124 66.1
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 4.8e-43 177.9 123 65.9
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 4.8e-43 177.9 126 66.7
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 4.8e-43 177.9 123 68.3
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 8.1e-43 177.2 103 80.6
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 1.1e-42 176.8 124 68.5
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 1.1e-42 176.8 126 65.9
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 1.1e-42 176.8 129 65.1
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.4e-42 176.4 127 67.7
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 1.8e-42 176.0 122 68.9
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 4.0e-42 174.9 124 66.1
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 4.0e-42 174.9 121 68.6
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 5.3e-42 174.5 124 66.1
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 1.2e-41 173.3 125 65.6
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 2.0e-41 172.6 125 64.8
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 2.0e-41 172.6 125 64.8
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.7e-40 169.5 127 63.0
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.9e-40 168.7 127 66.1
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.8e-40 168.3 127 62.2
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 1.4e-39 166.4 126 63.5
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 5.4e-39 164.5 126 66.7
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 1.2e-38 163.3 126 61.1
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 8.7e-37 157.1 126 60.3
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 9.6e-36 153.7 127 59.1
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.8e-34 149.4 127 57.5
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 5.3e-34 147.9 95 73.7
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 9.9e-33 143.7 127 56.7
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 9.3e-31 137.1 97 71.1
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.1e-30 136.0 80 76.2
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 8.7e-29 130.6 77 74.0
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 4.3e-28 128.3 81 71.6
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 9.6e-28 127.1 127 53.5
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 3.8e-24 115.2 127 50.4
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 4.2e-23 111.7 115 52.2
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 6.0e-22 107.8 115 51.3
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 7.9e-22 107.5 67 73.1
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 7.9e-22 107.5 66 72.7
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 5.7e-20 101.3 116 48.3
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.2e-19 99.4 68 66.2
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 4.1e-18 95.1 72 63.9
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 5.9e-17 91.3 69 62.3
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 5.9e-17 91.3 132 39.4
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 1.6e-14 83.2 127 39.4
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 1.6e-14 83.2 114 40.4
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 2.3e-13 79.3 120 35.8
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 9.7e-12 73.9 119 35.3
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 2.4e-10 69.3 124 37.9
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 6.9e-10 67.8 84 41.7
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 9.1e-10 67.4 61 55.7
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 1.2e-09 67.0 64 45.3
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 3.4e-09 65.5 79 38.0
PRCOL_00003291 Prasinoderma coloniale HOM05D005465 ORTHO05D006612 3.2e-07 58.9 68 48.5


User provided reference genes

Program Settings