Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C002000.2 Cucumis melo HOM05D008369 ORTHO05D005932 1.2e-94 350.1 220 100.0
CsaV3_1G005690 Cucumis sativus L. HOM05D008369 ORTHO05D005932 1.1e-82 310.5 219 91.8
Sed0006867 Sechium edule HOM05D008369 ORTHO05D005932 1.7e-51 206.8 227 62.1
ClCG04G012080 Citrullus lanatus HOM05D008369 ORTHO05D005932 5.5e-47 191.8 185 64.9
MD14G1205100 Malus domestica HOM05D008369 ORTHO05D005932 5.0e-16 89.0 197 44.7
MD06G1197700 Malus domestica HOM05D008369 ORTHO05D005932 8.6e-16 88.2 193 43.0
Prupe.5G198500 Prunus persica HOM05D008369 ORTHO05D005932 1.8e-13 80.5 195 49.2
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 2.9e-11 73.2 195 33.8
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 3.2e-10 69.7 223 35.4
Gohir.A12G179000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.5e-09 66.2 188 34.0
FAN18G3211 Fragaria x ananassa HOM05D008369 ORTHO05D005932 4.6e-09 65.9 186 33.9
Gorai.008G194900 Gossypium raimondii HOM05D008369 ORTHO05D005932 3.0e-08 63.2 209 32.1
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 3.0e-08 63.2 207 31.9
FvH4_5g14530 Fragaria vesca HOM05D008369 ORTHO05D005932 3.9e-08 62.8 186 38.7
FAN13G2099 Fragaria x ananassa HOM05D008369 ORTHO05D005932 5.0e-08 62.4 186 39.2
Thecc.03G094300 Theobroma cacao HOM05D008369 ORTHO05D005932 5.0e-08 62.4 196 32.1
RcHm_v2.0_Chr7g0182121 Rosa chinensis HOM05D008369 ORTHO05D005932 6.6e-08 62.0 191 34.0
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 8.6e-08 61.6 209 31.6
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 1.1e-07 61.2 201 31.8
FAN08G2699 Fragaria x ananassa HOM05D008369 ORTHO05D005932 1.1e-07 61.2 207 36.7
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 2.5e-07 60.1 209 33.0
Gohir.A11G032000 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.3e-07 59.7 201 29.9
QL10p017723 Quercus lobata HOM05D008369 ORTHO05D005932 4.3e-07 59.3 184 42.4
Dinv38746 Davidia involucrata HOM05D008369 ORTHO05D005932 7.3e-07 58.5 200 43.0
Dinv10658 Davidia involucrata HOM05D008369 ORTHO05D005932 9.5e-07 58.2 192 35.9
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 1.2e-06 57.8 195 33.3
Rhsim08G0152100 Rhododendron simsii HOM05D008369 ORTHO05D005932 2.1e-06 57.0 105 37.1
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 3.6e-06 56.2 201 29.4
TAR006G0004 Trochodendron aralioides HOM05D009095 ORTHO05D005932 6.2e-06 55.5 190 36.3
arahy.Tifrunner.gnm1.ann1.7B8RN4 Arachis hypogaea HOM05D008369 ORTHO05D005932 8.1e-06 55.1 200 41.0


User provided reference genes

Program Settings