Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 2.1e-157 558.9 272 100.0
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 3.9e-151 538.1 272 96.0
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 6.8e-148 527.3 272 93.4
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 5.9e-107 391.3 270 68.9
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 1.6e-104 383.3 259 71.8
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 2.1e-104 382.9 252 73.8
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 1.4e-103 380.2 255 71.8
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.4e-103 380.2 255 71.0
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 1.4e-103 380.2 268 68.7
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 1.8e-103 379.8 255 71.0
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 2.3e-103 379.4 255 71.4
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.0e-103 379.0 255 71.0
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 6.7e-103 377.9 255 70.6
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 1.1e-102 377.1 247 73.3
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 4.3e-102 375.2 273 67.0
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 2.8e-101 372.5 254 69.7
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.8e-100 369.8 260 69.2
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 4.1e-100 368.6 247 70.0
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 6.9e-100 367.9 260 68.8
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 2.0e-99 366.3 260 68.8
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 2.6e-99 365.9 255 66.3
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 2.6e-99 365.9 188 89.9
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 4.5e-99 365.2 260 68.8
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.5e-99 365.2 252 67.9
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 5.9e-99 364.8 244 71.3
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 7.7e-99 364.4 267 66.3
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 1.0e-98 364.0 294 62.6
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 1.7e-98 363.2 255 68.6
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 2.9e-98 362.5 254 67.7
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 2.9e-98 362.5 248 69.0
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 3.8e-98 362.1 260 68.5
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 3.6e-96 355.5 255 67.5
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 4.7e-96 355.1 254 65.4
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 6.1e-96 354.8 264 65.5
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 1.4e-95 353.6 248 65.7
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.8e-95 353.2 255 66.3
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 3.0e-95 352.4 264 65.5
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 5.1e-95 351.7 256 65.6
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 1.1e-94 350.5 259 66.8
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 1.5e-94 350.1 256 64.1
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 2.0e-94 349.7 254 65.7
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 2.6e-94 349.4 254 65.0
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 4.4e-94 348.6 246 67.1
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 9.7e-94 347.4 245 67.3
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 2.2e-93 346.3 252 64.3
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 2.8e-93 345.9 250 62.4
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.8e-93 345.1 264 62.5
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 4.8e-93 345.1 254 65.4
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 4.8e-93 345.1 230 70.9
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 8.2e-93 344.4 267 60.3
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 1.1e-92 344.0 256 64.1
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.4e-92 343.6 260 66.2
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 1.4e-92 343.6 250 63.2
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 2.4e-92 342.8 252 63.5
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 4.1e-92 342.0 252 63.9
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 4.1e-92 342.0 259 64.5
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 5.3e-92 341.7 252 63.9
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 7.0e-92 341.3 241 66.0
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 9.1e-92 340.9 250 64.0
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 1.2e-91 340.5 251 63.7
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 2.0e-91 339.7 244 65.6
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 2.6e-91 339.3 240 67.1
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 3.5e-91 339.0 256 63.3
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 3.5e-91 339.0 250 64.0
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.5e-91 338.6 274 60.2
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 5.9e-91 338.2 244 63.9
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 1.0e-90 337.4 248 64.5
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 1.7e-90 336.7 241 65.1
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 3.8e-90 335.5 244 64.3
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 5.0e-90 335.1 245 63.3
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 5.0e-90 335.1 244 63.9
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 6.5e-90 334.7 302 57.0
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 1.1e-89 334.0 262 59.5
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.1e-89 334.0 274 62.8
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 1.5e-89 333.6 244 63.9
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.5e-89 332.8 254 63.0
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 2.5e-89 332.8 255 62.4
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 2.5e-89 332.8 255 62.0
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 3.2e-89 332.4 272 60.3
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 4.2e-89 332.0 244 65.2
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 5.5e-89 331.6 239 64.0
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 2.7e-88 329.3 317 54.3
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 3.6e-88 328.9 264 59.8
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 4.0e-87 325.5 252 61.5
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 1.1e-86 323.9 251 59.8
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.5e-86 323.6 261 57.9
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 2.0e-86 323.2 262 57.6
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 2.0e-86 323.2 268 59.0
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 3.3e-86 322.4 254 59.1
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 5.7e-86 321.6 262 56.9
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 7.5e-86 321.2 262 57.3
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 1.7e-85 320.1 254 59.1
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 2.2e-85 319.7 251 59.4
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 2.2e-85 319.7 251 59.4
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 3.7e-85 318.9 268 56.7
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 8.2e-85 317.8 254 57.5
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.8e-84 316.6 243 61.7
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.8e-84 316.6 243 61.7
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 4.1e-84 315.5 228 67.1
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 9.1e-84 314.3 262 58.4
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 9.1e-84 314.3 263 60.1
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 4.5e-83 312.0 262 57.6
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 1.3e-82 310.5 244 63.5
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 2.9e-82 309.3 262 57.3
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 2.9e-82 309.3 254 58.7
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 9.4e-81 304.3 262 56.9
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 9.4e-81 304.3 282 53.9
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 9.4e-81 304.3 247 60.3
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 4.0e-79 298.9 200 70.5
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.2e-78 297.4 200 70.0
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 2.0e-78 296.6 254 58.7
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 6.5e-74 281.6 231 58.9
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.1e-73 280.8 197 67.0
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 7.2e-73 278.1 168 77.4
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 2.1e-72 276.6 247 53.4
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.0e-71 274.2 209 63.2
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 5.2e-71 271.9 226 57.5
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 2.7e-67 259.6 252 52.4
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.7e-66 256.9 254 51.6
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 5.0e-66 255.4 224 53.6
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 8.0e-64 248.1 222 52.7
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 8.9e-63 244.6 181 61.3
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 8.3e-61 238.0 241 50.6
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 1.3e-58 230.7 170 61.8
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 8.6e-58 228.0 193 57.5
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 8.0e-56 221.5 196 54.6
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 1.0e-55 221.1 128 79.7
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.6e-54 216.5 243 47.3
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 1.7e-53 213.8 228 48.7
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 2.5e-49 199.9 139 67.6
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 4.3e-49 199.1 130 72.3
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 3.6e-48 196.1 255 44.3
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 1.7e-45 187.2 126 70.6
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 2.7e-43 179.9 223 42.6
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 1.6e-40 170.6 231 37.7
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.7e-40 169.1 293 36.5
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 4.7e-40 169.1 138 59.4
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 1.4e-39 167.5 129 58.1
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.2e-38 164.5 112 67.9
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 1.2e-35 154.5 115 61.7
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.5e-33 147.5 212 42.5
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 9.9e-30 134.8 101 61.4
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 4.3e-25 119.4 79 70.9
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 2.6e-22 110.2 65 75.4
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 8.7e-18 95.1 82 51.2
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.3e-16 91.3 60 70.0
DCAR_015961 Daucus carota HOM05D004915 ORTHO05D006048 7.4e-09 65.5 69 44.9
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 3.7e-08 63.2 195 27.2


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