Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 5.0e-64 247.7 129 100.0
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 3.4e-57 224.9 129 88.4
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.4e-53 213.0 117 94.0
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 9.7e-52 206.8 129 83.7
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 1.6e-25 119.8 135 54.1
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 2.0e-25 119.4 136 52.9
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.7e-25 119.0 96 62.5
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 1.0e-24 117.1 105 57.1
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.0e-24 117.1 95 62.1
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 1.0e-24 117.1 88 65.9
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.7e-24 116.3 83 66.3
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 2.9e-24 115.5 112 57.1
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 2.9e-24 115.5 78 69.2
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 3.8e-24 115.2 100 58.0
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 3.8e-24 115.2 88 64.8
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 6.6e-24 114.4 112 58.0
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 1.1e-23 113.6 103 58.3
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-23 113.6 131 51.1
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.1e-23 113.6 103 58.3
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.1e-23 113.6 80 67.5
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.1e-23 113.6 78 67.9
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.5e-23 113.2 131 50.4
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.5e-23 113.2 102 54.9
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.9e-23 112.8 131 49.6
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.5e-23 112.5 82 67.1
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.5e-23 112.5 116 54.3
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.5e-23 112.5 122 53.3
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 3.3e-23 112.1 78 66.7
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 4.3e-23 111.7 78 67.9
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 7.3e-23 110.9 79 68.4
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 9.5e-23 110.5 131 50.4
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.2e-22 110.2 84 61.9
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.2e-22 110.2 96 59.4
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 1.6e-22 109.8 89 59.6
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.1e-22 109.4 82 65.9
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 3.6e-22 108.6 92 62.0
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 3.6e-22 108.6 79 67.1
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 3.6e-22 108.6 79 67.1
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.6e-22 108.6 78 64.1
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 6.1e-22 107.8 93 60.2
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 8.0e-22 107.5 79 69.6
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 8.0e-22 107.5 93 62.4
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 1.0e-21 107.1 75 66.7
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 2.3e-21 105.9 108 54.6
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 2.3e-21 105.9 104 52.9
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.3e-21 105.9 78 61.5
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 2.3e-21 105.9 78 65.4
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 6.8e-21 104.4 79 64.6
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 6.8e-21 104.4 79 67.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 6.8e-21 104.4 80 65.0
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 8.9e-21 104.0 131 47.3
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 8.9e-21 104.0 134 47.8
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.2e-20 103.6 113 48.7
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.2e-20 103.6 74 70.3
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.5e-20 103.2 82 62.2
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 1.5e-20 103.2 102 56.9
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 2.6e-20 102.4 79 64.6
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 7.5e-20 100.9 110 49.1
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 7.5e-20 100.9 72 69.4
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 9.8e-20 100.5 108 52.8
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.3e-19 100.1 89 59.6
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.2e-19 99.4 77 59.7
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 2.9e-19 99.0 80 61.2
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 3.7e-19 98.6 130 52.3
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 3.7e-19 98.6 96 56.2
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 4.9e-19 98.2 96 55.2
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 4.9e-19 98.2 87 59.8
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 6.4e-19 97.8 131 48.9
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 8.3e-19 97.4 75 65.3
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 8.3e-19 97.4 97 51.5
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 8.3e-19 97.4 87 58.6
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 8.3e-19 97.4 75 62.7
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 1.1e-18 97.1 102 53.9
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.1e-18 97.1 104 53.8
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 1.4e-18 96.7 76 61.8
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 1.4e-18 96.7 76 61.8
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 1.4e-18 96.7 76 61.8
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.4e-18 96.7 81 59.3
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 1.8e-18 96.3 75 64.0
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 1.8e-18 96.3 122 48.4
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 3.2e-18 95.5 75 61.3
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.1e-18 95.1 75 61.3
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 4.1e-18 95.1 75 61.3
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 4.1e-18 95.1 75 61.3
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 4.1e-18 95.1 75 61.3
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.1e-18 95.1 105 52.4
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 4.1e-18 95.1 127 42.5
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 5.4e-18 94.7 73 60.3
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 5.4e-18 94.7 81 61.7
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 7.0e-18 94.4 126 49.2
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 9.2e-18 94.0 76 61.8
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.2e-17 93.6 73 61.6
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 1.6e-17 93.2 99 52.5
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.6e-17 93.2 107 48.6
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-17 92.8 134 46.3
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 2.0e-17 92.8 75 61.3
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 2.7e-17 92.4 134 46.3
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.5e-17 92.0 77 61.0
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 3.5e-17 92.0 80 58.8
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 3.5e-17 92.0 77 58.4
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 4.6e-17 91.7 85 56.5
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 5.9e-17 91.3 66 62.1
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 5.0e-16 88.2 90 52.2
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 3.3e-15 85.5 112 46.4
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 9.5e-15 84.0 63 69.8
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 9.5e-15 84.0 63 69.8
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 1.2e-14 83.6 130 42.3
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 3.6e-14 82.0 75 60.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 6.8e-13 77.8 61 59.0
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 8.9e-13 77.4 60 65.0
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 8.9e-13 77.4 60 61.7
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.2e-11 72.8 62 61.3
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 2.4e-10 69.3 108 39.8
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 5.4e-10 68.2 64 48.4
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 1.7e-08 63.2 47 55.3
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.0e-08 62.4 57 57.9
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 8.6e-08 60.8 52 61.5


User provided reference genes

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