Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 9.6e-54 213.4 119 100.0
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 6.9e-52 207.2 119 95.0
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 2.4e-49 198.7 117 93.2
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 8.4e-42 173.7 120 81.7
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 8.7e-31 137.1 127 68.5
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 2.5e-30 135.6 129 64.3
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 2.1e-29 132.5 121 70.2
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 6.2e-29 131.0 123 61.8
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 8.2e-29 130.6 122 63.9
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 5.3e-28 127.9 130 66.9
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 5.3e-28 127.9 129 61.2
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 1.2e-27 126.7 131 67.9
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 2.0e-27 125.9 120 62.5
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 2.0e-27 125.9 120 62.5
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 4.5e-27 124.8 122 59.8
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 4.5e-27 124.8 122 64.8
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 7.6e-27 124.0 120 60.8
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.0e-26 123.6 121 66.1
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 1.3e-26 123.2 119 59.7
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 1.7e-26 122.9 124 68.5
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 1.7e-26 122.9 119 68.9
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 2.2e-26 122.5 116 63.8
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 2.2e-26 122.5 120 68.3
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 2.9e-26 122.1 121 58.7
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 3.8e-26 121.7 122 59.8
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 1.1e-25 120.2 122 64.8
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 1.1e-25 120.2 120 63.3
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 1.1e-25 120.2 122 59.0
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 1.1e-25 120.2 122 59.0
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.4e-25 119.8 132 56.8
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 1.4e-25 119.8 131 55.0
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 1.9e-25 119.4 130 61.5
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 2.5e-25 119.0 124 63.7
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 2.5e-25 119.0 123 61.0
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 5.5e-25 117.9 124 59.7
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.5e-25 117.9 133 60.9
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 5.5e-25 117.9 133 58.6
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 7.2e-25 117.5 126 58.7
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 7.2e-25 117.5 124 63.7
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 9.3e-25 117.1 126 67.5
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 1.6e-24 116.3 128 62.5
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 2.7e-24 115.5 122 60.7
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 3.5e-24 115.2 120 64.2
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 3.5e-24 115.2 144 52.8
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.5e-24 115.2 137 58.4
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 4.6e-24 114.8 119 66.4
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 4.6e-24 114.8 121 59.5
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 4.6e-24 114.8 119 58.0
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 4.6e-24 114.8 130 63.1
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 4.6e-24 114.8 121 57.0
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 6.1e-24 114.4 119 55.5
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 6.1e-24 114.4 137 59.1
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 6.1e-24 114.4 119 55.5
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.0e-23 113.6 129 61.2
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 1.3e-23 113.2 130 53.1
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 1.8e-23 112.8 122 60.7
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 3.0e-23 112.1 124 57.3
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 3.9e-23 111.7 122 63.9
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 8.7e-23 110.5 126 65.1
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 2.5e-22 109.0 122 62.3
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 2.5e-22 109.0 134 57.5
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 2.5e-22 109.0 119 56.3
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 3.3e-22 108.6 119 58.8
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 5.7e-22 107.8 125 53.6
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 7.4e-22 107.5 129 59.7
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 9.7e-22 107.1 133 60.2
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 1.6e-21 106.3 133 57.9
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 2.8e-21 105.5 126 56.3
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 2.8e-21 105.5 126 56.3
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 4.8e-21 104.8 124 62.1
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 6.3e-21 104.4 134 58.2
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 8.2e-21 104.0 123 56.9
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 1.8e-20 102.8 128 57.0
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 1.2e-19 100.1 124 53.2
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 1.5e-19 99.8 124 58.9
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 1.5e-19 99.8 122 59.0
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 2.6e-19 99.0 124 57.3
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 2.6e-19 99.0 124 57.3
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.6e-19 99.0 120 56.7
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 3.4e-19 98.6 125 56.8
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 3.4e-19 98.6 125 48.8
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 4.5e-19 98.2 129 55.0
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 5.9e-19 97.8 119 50.4
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 1.0e-18 97.1 111 61.3
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.3e-18 96.7 128 54.7
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 1.6e-16 89.7 66 71.2
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 4.6e-16 88.2 66 69.7
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 2.0e-14 82.8 122 50.8
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 1.3e-13 80.1 103 49.5
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 1.8e-12 76.3 119 42.0
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 3.1e-12 75.5 55 67.3
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 4.1e-12 75.1 136 39.0
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 2.6e-11 72.4 48 70.8
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 7.7e-11 70.9 74 52.7
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 1.7e-10 69.7 45 73.3
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 3.8e-10 68.6 70 50.0
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.4e-09 66.6 59 61.0
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 2.3e-07 59.3 126 42.1


User provided reference genes

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