Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001048.2 Cucumis melo HOM05D002166 ORTHO05D002634 1.1e-44 183.0 93 100.0
CsaV3_7G021790 Cucumis sativus L. HOM05D002166 ORTHO05D002634 6.6e-34 147.1 93 81.7
Sed0016610 Sechium edule HOM05D002166 ORTHO05D002634 2.4e-28 128.6 93 69.9
ClCG09G010790 Citrullus lanatus HOM05D002166 ORTHO05D002634 3.5e-27 124.8 93 71.0
Sed0003386 Sechium edule HOM05D002166 ORTHO05D002634 1.4e-23 112.8 93 65.6
MELO3C017518.2 Cucumis melo HOM05D002166 ORTHO05D002634 3.6e-16 88.2 44 95.5
MELO3C025366.2 Cucumis melo HOM05D002166 ORTHO05D002634 8.4e-13 77.0 94 46.8
ClCG10G005330 Citrullus lanatus HOM05D002166 ORTHO05D002634 1.6e-11 72.8 94 44.7
CsaV3_3G005040 Cucumis sativus L. HOM05D002166 ORTHO05D002634 2.1e-11 72.4 94 43.6
CANSAT11G1162 Cannabis sativa HOM05D002166 ORTHO05D002634 8.7e-10 67.0 97 45.4
FAN11G2830 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.5e-09 65.5 92 41.3
CiPaw.11G189200 Carya illinoinensis HOM05D002166 ORTHO05D002634 1.3e-08 63.2 92 44.6
Prupe.4G212500 Prunus persica HOM05D002166 ORTHO05D002634 2.1e-08 62.4 95 45.3
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 8.1e-08 60.5 90 46.7
MELO3C034842.2 Cucumis melo HOM05D002166 ORTHO05D002634 1.1e-07 60.1 37 83.8
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 1.1e-07 60.1 88 47.7
TWI38G2284 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 4.0e-07 58.2 92 44.6
FAN21G3541 Fragaria x ananassa HOM05D002166 ORTHO05D002634 5.3e-07 57.8 92 41.3
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 5.3e-07 57.8 92 44.6
Thhalv10011268m.g Eutrema salsugineum HOM05D002166 ORTHO05D002634 6.9e-07 57.4 93 45.2
DCAR_022561 Daucus carota HOM05D002166 ORTHO05D002634 1.2e-06 56.6 77 41.6
Sp1g37510 Schrenkiella parvula HOM05D002166 ORTHO05D002634 1.5e-06 56.2 97 44.3
Cfa020346 Carpinus fangiana HOM05D002166 ORTHO05D002634 2.6e-06 55.5 91 39.6
FAN25G0402 Fragaria x ananassa HOM05D002166 ORTHO05D002634 2.6e-06 55.5 95 37.9
CARHR040710 Cardamine hirsuta HOM05D002166 ORTHO05D002634 3.4e-06 55.1 97 44.3
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 4.4e-06 54.7 96 35.4
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 5.8e-06 54.3 93 45.2
Psat2g011000 Pisum sativum HOM05D002166 ORTHO05D002634 7.6e-06 53.9 68 41.2
AT1G50660 Arabidopsis thaliana HOM05D002166 ORTHO05D002634 9.9e-06 53.5 98 44.9
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 9.9e-06 53.5 75 46.7
BcaC08g43244 Brassica carinata HOM05D002166 ORTHO05D002634 9.9e-06 53.5 88 42.0
BolC6t35705H Brassica oleracea HOM05D002166 ORTHO05D002634 9.9e-06 53.5 88 42.0
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 9.9e-06 53.5 76 42.1
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 9.9e-06 53.5 70 48.6
LjContig00272g0027317 Lotus japonicus HOM05D002166 ORTHO05D002634 9.9e-06 53.5 76 39.5
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 9.9e-06 53.5 95 40.0


User provided reference genes

Program Settings