Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000925.2 Cucumis melo HOM05D001966 ORTHO05D007227 2.0e-12 74.3 34 100.0
MELO3C027875.2 Cucumis melo HOM05D001966 ORTHO05D007227 1.3e-11 71.6 34 97.1
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.9e-07 57.8 34 76.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.5e-07 57.4 33 81.8
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 2.5e-07 57.4 33 81.8
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 2.5e-07 57.4 33 81.8
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 4.3e-07 56.6 33 81.8
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 5.6e-07 56.2 33 78.8
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 5.6e-07 56.2 33 78.8
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC29t60539H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC29t60556H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC35t60713H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC44t60814H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC45t60900H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC45t60918H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC46t60967H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BolSC49t61133H Brassica oleracea HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BraSC103t45419Z Brassica rapa HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BraSC25t45921Z Brassica rapa HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BraSC59t46509Z Brassica rapa HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
BraSC59t46540Z Brassica rapa HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
Cfa023004 Carpinus fangiana HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
FvH4_c3g00070 Fragaria vesca HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 5.6e-07 56.2 33 78.8
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 75.8
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 78.8
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 2.1e-06 54.3 33 78.8
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 2.8e-06 53.9 34 73.5
Aqoxy2G01968 Aquilegia oxysepala HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
arahy.Tifrunner.gnm1.ann1.6ZZ12G Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
arahy.Tifrunner.gnm1.ann1.77ZW6W Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 78.8
arahy.Tifrunner.gnm1.ann1.EGZ6K4 Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 75.8
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.7e-06 53.1 34 70.6
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 4.7e-06 53.1 33 72.7
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 6.2e-06 52.8 33 72.7
Phvul.003G067400 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 6.2e-06 52.8 33 75.8
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 8.1e-06 52.4 32 75.0


User provided reference genes

Program Settings