Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000923.2 Cucumis melo HOM05D000995 ORTHO05D002620 2.2e-84 315.5 148 100.0
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.7e-82 308.5 148 98.6
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.3e-81 306.2 148 96.6
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 5.1e-81 304.3 148 95.3
MELO3C000149.2 Cucumis melo HOM05D000995 ORTHO05D000638 5.7e-80 300.8 148 96.6
MELO3C029552.2 Cucumis melo HOM05D000995 ORTHO05D000638 3.1e-78 295.0 148 92.6
MELO3C027512.2 Cucumis melo HOM05D000995 ORTHO05D000638 5.3e-78 294.3 148 93.2
MELO3C000457.2 Cucumis melo HOM05D000995 ORTHO05D000638 3.4e-77 291.6 148 93.2
MELO3C014207.2 Cucumis melo HOM05D000995 ORTHO05D000638 6.5e-76 287.3 148 91.9
MELO3C027312.2 Cucumis melo HOM05D000995 ORTHO05D001773 1.4e-75 286.2 141 94.3
MELO3C034175.2 Cucumis melo HOM05D000995 ORTHO05D000638 6.3e-55 217.6 116 83.6
MELO3C029462.2 Cucumis melo HOM05D000995 ORTHO05D002620 4.2e-51 204.9 118 82.2
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.2e-45 186.8 148 56.8
ClCG01G009740 Citrullus lanatus HOM05D000995 ORTHO05D000638 2.0e-45 186.0 148 55.4
ClCG08G006380 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.9e-45 184.5 148 56.1
ClCG09G009920 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.9e-45 184.5 148 56.1
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.1e-43 180.3 148 54.7
ClCG01G008830 Citrullus lanatus HOM05D000995 ORTHO05D000638 1.5e-43 179.9 148 55.4
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.2e-43 178.3 148 54.7
ClCG09G014960 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.2e-41 171.4 148 52.7
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.4e-40 168.7 148 52.7
ClCG11G011320 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.8e-39 165.6 132 54.5
ClCG06G010440 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.0e-37 159.5 124 57.3
ClCG11G010690 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.5e-35 153.3 116 56.0
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.6e-35 151.4 148 49.3
Sed0017387 Sechium edule HOM05D000995 ORTHO05D001773 2.1e-34 149.4 148 49.3
Sed0020039 Sechium edule HOM05D000995 ORTHO05D000638 2.1e-34 149.4 148 49.3
Sed0018066 Sechium edule HOM05D000995 ORTHO05D000638 1.0e-33 147.1 148 49.3
Sed0007388 Sechium edule HOM05D000995 ORTHO05D000638 1.8e-33 146.4 148 48.6
Sed0008092 Sechium edule HOM05D000995 ORTHO05D001773 5.8e-32 141.4 148 46.6
Sed0018372 Sechium edule HOM05D000995 ORTHO05D000638 5.8e-32 141.4 148 47.3
MELO3C027378.2 Cucumis melo HOM05D000995 ORTHO05D001773 3.6e-26 122.1 60 93.3
MELO3C034272.2 Cucumis melo HOM05D000995 ORTHO05D002620 8.0e-26 120.9 67 79.1
MELO3C005191.2 Cucumis melo HOM05D000995 ORTHO05D002620 5.2e-25 118.2 78 71.8
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 3.2e-22 109.0 138 41.3
ClCG01G008450 Citrullus lanatus HOM05D000995 ORTHO05D001773 9.2e-22 107.5 126 42.9
MELO3C000447.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.7e-21 105.9 132 42.4
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 3.5e-21 105.5 148 36.5
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.0e-20 104.0 148 37.2
MELO3C019586.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.3e-20 102.8 132 40.9
Sed0014458 Sechium edule HOM05D000995 ORTHO05D012510 6.6e-20 101.3 154 40.3
QL01p006663 Quercus lobata HOM05D067426 ORTHO05D001773 1.5e-19 100.1 138 33.3
ClCG10G005780 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.5e-19 99.4 104 47.1
ClCG02G010500 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.3e-19 99.0 148 39.2
MELO3C027458.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.3e-19 98.6 46 93.5
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 1.8e-17 93.2 150 32.7
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.3e-17 92.8 132 34.8
ClCG03G010780 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.2e-16 90.5 148 35.8
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 1.2e-16 90.5 142 35.2
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 1.2e-16 90.5 128 40.6
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 2.0e-16 89.7 131 38.2
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 3.4e-16 89.0 128 39.8
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.4e-16 88.6 128 39.8
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 4.4e-16 88.6 128 39.8
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 1.3e-15 87.0 128 39.1
ClCG04G004480 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.4e-14 82.8 82 47.6
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 2.4e-14 82.8 128 39.1
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-14 82.0 123 36.6
FvH4_4g15164 Fragaria vesca HOM05D000995 ORTHO05D002620 5.4e-14 81.6 147 32.0
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 5.4e-14 81.6 145 32.4
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.4e-14 81.6 139 29.5
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.1e-13 79.7 141 33.3
Rhsim03G0094500 Rhododendron simsii HOM05D000995 ORTHO05D000638 2.1e-13 79.7 161 34.2
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 2.7e-13 79.3 121 38.0
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-13 79.0 128 36.7
QL11p006726 Quercus lobata HOM05D000995 ORTHO05D001773 3.5e-13 79.0 134 32.8
QL02p080036 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
QL05p048948 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
QL06p019608 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
QL08p038287 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
QL93p0181_0012 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
QL93p0209_0006 Quercus lobata HOM05D000995 ORTHO05D001773 6.0e-13 78.2 121 38.0
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.0e-12 77.4 77 44.2
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 1.0e-12 77.4 77 44.2
Sed0026097 Sechium edule HOM05D000995 ORTHO05D000638 1.7e-12 76.6 69 52.2
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 3.0e-12 75.9 119 32.8
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 5.1e-12 75.1 154 31.8
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 5.1e-12 75.1 112 38.4
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 6.6e-12 74.7 121 36.4
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 6.6e-12 74.7 121 36.4
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 8.6e-12 74.3 154 31.8
EL10Ac2g03521 Beta vulgaris HOM05D004781 ORTHO05D001773 8.6e-12 74.3 154 31.8
EL10Ac3g06382 Beta vulgaris HOM05D004781 ORTHO05D001773 8.6e-12 74.3 154 31.8
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 8.6e-12 74.3 154 31.8
QL08p015694 Quercus lobata HOM05D000995 ORTHO05D001773 1.9e-11 73.2 150 31.3
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 3.3e-11 72.4 140 29.3
EL10Ac9g22875 Beta vulgaris HOM05D004781 ORTHO05D001773 5.6e-11 71.6 154 31.2
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.6e-11 71.6 140 28.6
FvH4_4g22273 Fragaria vesca HOM05D000995 ORTHO05D002620 7.3e-11 71.2 147 29.3
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 9.5e-11 70.9 78 41.0
ClCG10G007040 Citrullus lanatus HOM05D023725 ORTHO05D000638 1.2e-10 70.5 136 33.8
Hund26451 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.6e-10 70.1 149 28.9
MELO3C033121.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.1e-10 69.7 54 57.4
FAN03G0592 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.8e-10 69.3 79 40.5
Hund30412 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.6e-10 68.9 149 29.5
EL10Ac6g13965 Beta vulgaris HOM05D004781 ORTHO05D001773 4.7e-10 68.6 154 30.5
ClCG01G012490 Citrullus lanatus HOM05D000995 ORTHO05D001773 8.1e-10 67.8 138 34.1
FAN03G2545 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.1e-09 67.4 87 40.2
FAN21G1141 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.1e-09 67.4 114 34.2
Hund10681 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-09 67.0 149 28.9
Hund29540 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-09 67.0 149 28.9
Hund29568 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-09 67.0 149 28.9
Hund29617 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-09 67.0 149 28.9
Hund29800 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.4e-09 67.0 149 28.9
Hund01802 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.8e-09 66.6 108 34.3
Hund26237 Selenicereus undatus HOM05D007953 ORTHO05D009936 2.4e-09 66.2 143 29.4
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.1e-09 65.9 142 28.2
Hund13033 Selenicereus undatus HOM05D004781 ORTHO05D001773 5.2e-09 65.1 108 33.3
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 6.8e-09 64.7 119 29.4
AUR62035177 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.2e-08 63.9 94 38.3
AUR62036388 Chenopodium quinoa HOM05D000995 ORTHO05D000638 1.2e-08 63.9 124 29.8
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.2e-08 63.9 108 32.4
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.2e-08 63.9 108 33.3
Hund02727 Selenicereus undatus HOM05D007953 ORTHO05D009936 1.5e-08 63.5 68 42.6
Hund17483 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.5e-08 63.5 149 28.2
Hund29669 Selenicereus undatus HOM05D007953 ORTHO05D009936 1.5e-08 63.5 68 42.6
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.5e-08 63.5 119 29.4
Hund10446 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.0e-08 63.2 108 33.3
Hund04316 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.6e-08 62.8 108 33.3
Hund15627 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.6e-08 62.8 108 32.4
Hund29749 Selenicereus undatus HOM05D004781 ORTHO05D001773 2.6e-08 62.8 108 33.3
Hund03527 Selenicereus undatus HOM05D007953 ORTHO05D009936 3.4e-08 62.4 68 42.6
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 3.4e-08 62.4 113 29.2
FAN04G0230 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.4e-08 62.0 101 34.7
Nitab4.5_0000481g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 4.4e-08 62.0 79 38.0
Hund16293 Selenicereus undatus HOM05D004781 ORTHO05D001773 4.4e-08 62.0 108 32.4
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.4e-08 62.0 120 30.8
CAN.G322.132 Capsicum annuum HOM05D000995 ORTHO05D000638 5.8e-08 61.6 92 30.4
FAN17G0461 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.8e-08 61.6 80 36.2
FAN08G0912 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.6e-08 61.2 79 36.7
FAN20G1210 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.6e-08 61.2 87 39.1
Hund23885 Selenicereus undatus HOM05D004781 ORTHO05D001773 7.6e-08 61.2 104 34.6
Hund24690 Selenicereus undatus HOM05D004781 ORTHO05D001773 9.9e-08 60.8 91 36.3
AUR62013983 Chenopodium quinoa HOM05D004781 ORTHO05D001773 1.7e-07 60.1 87 39.1
COL.COLO4_28174 Corchorus olitorius HOM05D016252 ORTHO05D000638 1.7e-07 60.1 105 31.4
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.7e-07 60.1 150 27.3
FAN28G2204 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.2e-07 59.7 87 36.8
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.2e-07 59.7 120 29.2
AUR62026535 Chenopodium quinoa HOM05D000995 ORTHO05D000638 2.9e-07 59.3 94 37.2
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.9e-07 59.3 150 26.7
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.8e-07 58.9 148 28.4
FAN03G1525 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.9e-07 58.5 79 35.4
Nitab4.5_0000022g0410 Nicotiana tabacum HOM05D000995 ORTHO05D001773 4.9e-07 58.5 60 41.7
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 4.9e-07 58.5 79 38.0
AUR62043693 Chenopodium quinoa HOM05D004781 ORTHO05D001773 6.4e-07 58.2 94 36.2
AUR62027594 Chenopodium quinoa HOM05D000995 ORTHO05D001773 8.4e-07 57.8 124 30.6
FvH4_2g15190 Fragaria vesca HOM05D000995 ORTHO05D002620 8.4e-07 57.8 78 35.9
FAN03G3450 Fragaria x ananassa HOM05D000995 ORTHO05D002620 8.4e-07 57.8 87 36.8
FAN21G3797 Fragaria x ananassa HOM05D000995 ORTHO05D002620 8.4e-07 57.8 87 35.6
ClCG04G001610 Citrullus lanatus HOM05D000995 ORTHO05D000638 1.4e-06 57.0 41 58.5
COL.COLO4_17167 Corchorus olitorius HOM05D016252 ORTHO05D000638 1.4e-06 57.0 101 31.7
FAN02G1939 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.9e-06 56.6 78 37.2
FAN13G1226 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.9e-06 56.6 78 35.9
FAN17G0116 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.9e-06 56.6 87 35.6
FAN15G3269 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.4e-06 56.2 78 37.2
FAN20G1567 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.4e-06 56.2 78 35.9
FAN03G2265 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.2e-06 55.8 78 35.9
FAN21G0715 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.2e-06 55.8 78 35.9
FAN24G0600 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.2e-06 55.8 78 35.9
FAN28G1060 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.2e-06 55.8 78 37.2
FAN02G3797 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.2e-06 55.5 87 34.5
FAN15G3418 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.2e-06 55.5 87 35.6
FAN22G1478 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.4e-06 55.1 78 35.9
FAN27G1182 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.4e-06 55.1 105 30.5
FAN07G2626 Fragaria x ananassa HOM05D000995 ORTHO05D000638 7.1e-06 54.7 56 44.6
FAN23G1277 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.1e-06 54.7 79 34.2
FAN22G0912 Fragaria x ananassa HOM05D000995 ORTHO05D002620 9.2e-06 54.3 78 34.6


User provided reference genes

Program Settings