Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.4e-71 272.7 129 100.0
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 1.7e-64 249.2 119 98.3
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 1.9e-63 245.7 121 95.0
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 4.5e-57 224.6 121 87.6
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 4.5e-57 224.6 121 87.6
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 2.2e-56 222.2 121 86.8
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 2.2e-56 222.2 121 85.1
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 2.9e-56 221.9 121 86.0
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 5.0e-56 221.1 125 80.8
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 5.0e-56 221.1 122 87.7
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 6.5e-56 220.7 125 84.0
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 6.5e-56 220.7 121 86.0
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 6.5e-56 220.7 121 86.0
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 6.5e-56 220.7 126 83.3
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 6.5e-56 220.7 118 87.3
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 1.1e-55 219.9 121 84.3
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 1.1e-55 219.9 122 83.6
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.4e-55 219.5 125 80.8
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 1.4e-55 219.5 122 83.6
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.9e-55 219.2 125 80.8
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.5e-55 218.8 125 84.8
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 2.5e-55 218.8 123 81.3
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 3.2e-55 218.4 118 85.6
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 4.2e-55 218.0 118 85.6
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 5.5e-55 217.6 125 84.0
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 5.5e-55 217.6 125 84.0
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 5.5e-55 217.6 121 86.0
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 7.2e-55 217.2 125 82.4
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 9.4e-55 216.9 118 84.7
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 1.6e-54 216.1 117 86.3
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 2.1e-54 215.7 117 85.5
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.7e-54 215.3 121 84.3
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.7e-54 215.3 121 84.3
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.6e-54 214.9 117 85.5
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 3.6e-54 214.9 111 91.0
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 4.7e-54 214.5 124 83.1
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 6.1e-54 214.2 125 82.4
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 7.9e-54 213.8 111 90.1
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 7.9e-54 213.8 117 85.5
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 7.9e-54 213.8 117 85.5
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.4e-53 213.0 121 83.5
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 1.4e-53 213.0 117 85.5
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 1.4e-53 213.0 125 81.6
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.8e-53 212.6 111 86.5
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 2.3e-53 212.2 118 84.7
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 2.3e-53 212.2 121 83.5
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 3.0e-53 211.8 115 86.1
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 3.9e-53 211.5 122 83.6
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 6.7e-53 210.7 136 74.3
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 1.1e-52 209.9 121 79.3
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 1.5e-52 209.5 117 84.6
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 2.0e-52 209.1 121 82.6
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 2.6e-52 208.8 123 80.5
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 3.3e-52 208.4 129 76.7
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 4.4e-52 208.0 121 81.0
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 4.4e-52 208.0 116 82.8
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 9.7e-52 206.8 122 79.5
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.3e-51 206.5 121 81.0
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 1.3e-51 206.5 115 83.5
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 1.7e-51 206.1 115 83.5
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.7e-51 206.1 125 80.8
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.2e-51 205.7 115 84.3
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 2.8e-51 205.3 149 68.5
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 4.8e-51 204.5 121 78.5
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 4.8e-51 204.5 115 83.5
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 1.8e-50 202.6 131 73.3
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 1.8e-50 202.6 122 77.9
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 4.1e-50 201.4 121 80.2
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 5.3e-50 201.1 114 82.5
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 4.5e-49 198.0 138 71.7
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 5.9e-49 197.6 115 80.0
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 7.7e-49 197.2 126 75.4
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 2.9e-48 195.3 132 74.2
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 2.9e-48 195.3 132 74.2
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 2.9e-48 195.3 132 74.2
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 2.9e-48 195.3 132 74.2
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 6.5e-48 194.1 129 72.1
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.1e-47 193.4 118 74.6
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 7.2e-47 190.7 118 77.1
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 4.0e-45 184.9 111 74.8
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.5e-44 183.0 90 92.2
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 5.7e-44 181.0 116 75.0
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 7.5e-44 180.6 121 68.6
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 6.3e-43 177.6 111 76.6
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 3.1e-42 175.3 87 88.5
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 5.3e-42 174.5 118 70.3
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 5.3e-42 174.5 87 88.5
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 7.0e-42 174.1 113 69.0
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 7.0e-42 174.1 87 87.4
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 9.1e-42 173.7 87 90.8
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 1.2e-41 173.3 87 88.5
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 1.2e-41 173.3 129 65.1
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 2.0e-41 172.6 129 65.1
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 2.7e-41 172.2 129 63.6
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 3.5e-41 171.8 87 86.2
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 5.9e-41 171.0 115 70.4
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 5.9e-41 171.0 111 71.2
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 6.5e-40 167.5 118 69.5
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.1e-39 166.8 118 69.5
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 1.0e-37 160.2 119 68.9
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 2.0e-36 156.0 129 60.5
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.6e-36 155.6 105 73.3
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.7e-35 152.9 105 72.4
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 2.3e-32 142.5 111 65.8
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 3.8e-32 141.7 114 61.4
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 5.7e-28 127.9 62 88.7
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 2.8e-22 109.0 70 77.1
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.0e-17 92.8 151 43.0
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 1.7e-16 89.7 107 45.8
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.6e-14 82.0 54 77.8
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.1e-13 80.5 67 65.7
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.3e-08 63.5 35 77.1
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.3e-08 63.5 113 35.4
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 1.6e-06 56.6 40 70.0
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 2.1e-06 56.2 40 70.0
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 2.8e-06 55.8 40 70.0


User provided reference genes

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