Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000406.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.3e-189 663.7 324 100.0
MELO3C000403.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.2e-180 634.0 324 96.0
MELO3C023377.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.7e-158 560.5 330 81.8
MELO3C004331.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-73 278.9 301 46.5
MELO3C014073.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.1e-73 278.9 291 47.1
MELO3C031327.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-70 270.8 296 44.9
MELO3C004264.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.4e-67 260.0 209 53.6
MELO3C006457.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.6e-65 251.5 242 47.9
ClCG06G018450 Citrullus lanatus HOM05D007588 ORTHO05D001339 2.5e-64 250.0 290 46.9
MELO3C014251.2 Cucumis melo HOM05D007588 ORTHO05D001339 7.3e-64 248.4 228 52.6
MELO3C005552.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-63 246.9 274 49.3
MELO3C035530.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.6e-63 246.1 274 48.5
MELO3C026771.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.4e-62 243.4 274 48.2
MELO3C023616.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-59 234.2 302 44.0
MELO3C021089.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-58 230.3 323 42.4
MELO3C009067.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.7e-57 227.3 285 42.1
MELO3C004043.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.1e-56 224.6 303 41.3
Sed0018778 Sechium edule HOM05D007588 ORTHO05D001339 1.8e-54 217.2 214 44.9
Sed0017106 Sechium edule HOM05D007588 ORTHO05D001339 2.0e-53 213.8 270 40.7
MELO3C012990.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.9e-52 209.9 183 50.3
Sed0011849 Sechium edule HOM05D007588 ORTHO05D001339 3.8e-52 209.5 227 42.7
MELO3C025478.2 Cucumis melo HOM05D007588 ORTHO05D001339 8.4e-52 208.4 198 49.5
Sed0024011 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-51 208.0 186 48.9
Sed0025559 Sechium edule HOM05D007588 ORTHO05D001339 1.1e-51 208.0 301 37.2
ClCG10G001990 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.0e-49 201.4 316 38.6
Sed0005938 Sechium edule HOM05D007588 ORTHO05D001339 5.1e-49 199.1 267 39.7
ClCG03G008310 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.9e-48 197.2 212 45.8
Sed0002972 Sechium edule HOM05D007588 ORTHO05D001339 4.0e-46 189.5 211 41.7
MELO3C003179.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.0e-46 188.3 153 57.5
CsaV3_5G024960 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.5e-45 187.6 208 45.7
MELO3C029797.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.9e-45 184.9 177 50.8
MELO3C024617.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.8e-44 183.0 291 40.5
Sed0005891 Sechium edule HOM05D007588 ORTHO05D001339 3.8e-44 183.0 174 48.9
MELO3C004802.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.1e-42 177.2 142 52.8
CsaV3_6G033820 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.8e-41 174.1 151 47.0
MELO3C032919.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-40 171.0 142 51.4
Sed0001869 Sechium edule HOM05D007588 ORTHO05D001339 4.3e-40 169.5 168 44.6
Sed0012823 Sechium edule HOM05D007588 ORTHO05D001339 1.6e-34 151.0 149 43.0
Sed0008707 Sechium edule HOM05D007588 ORTHO05D001339 2.1e-34 150.6 211 38.9
MELO3C003063.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.3e-32 143.3 120 48.3
ClCG08G006820 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.2e-31 139.0 168 39.9
Sed0000206 Sechium edule HOM05D007588 ORTHO05D001339 4.6e-26 122.9 262 32.1
Sed0024303 Sechium edule HOM05D007588 ORTHO05D001339 5.1e-25 119.4 137 38.7
MELO3C027442.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.5e-24 117.9 78 61.5
ClCG05G011080 Citrullus lanatus HOM05D007588 ORTHO05D001339 3.3e-24 116.7 208 33.7
MELO3C029351.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.0e-21 107.5 104 48.1
ClCG05G010700 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.3e-20 104.8 164 33.5
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 2.2e-20 104.0 158 33.5
Sed0016803 Sechium edule HOM05D007588 ORTHO05D001339 2.9e-20 103.6 296 25.7
MELO3C028681.2 Cucumis melo HOM05D007588 ORTHO05D001339 5.0e-20 102.8 132 34.8
CsaV3_1G009110 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.1e-19 101.7 82 56.1
MELO3C032938.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.4e-19 101.3 100 44.0
Lj3C1002T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-19 101.3 174 31.6
Lj2C907T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.9e-19 100.9 174 31.0
Sed0015279 Sechium edule HOM05D007588 ORTHO05D001339 4.2e-19 99.8 170 31.8
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 5.5e-19 99.4 221 29.0
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 5.5e-19 99.4 227 26.4
Lj1P545T41 Lonicera japonica HOM05D002180 ORTHO05D001339 9.4e-19 98.6 166 29.5
Lj6C461T8 Lonicera japonica HOM05D002180 ORTHO05D001339 9.4e-19 98.6 174 30.5
Lj1A337T22 Lonicera japonica HOM05D000561 ORTHO05D001339 1.2e-18 98.2 174 30.5
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-18 98.2 220 31.4
MELO3C020247.2 Cucumis melo HOM05D007588 ORTHO05D001339 1.6e-18 97.8 132 40.9
ClCG07G010540 Citrullus lanatus HOM05D007588 ORTHO05D001339 3.6e-18 96.7 130 43.1
ClCG06G009500 Citrullus lanatus HOM05D009184 ORTHO05D001339 6.1e-18 95.9 227 29.1
Lju432C3G2 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-18 95.9 212 29.7
Lj3C720T16 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-18 95.5 212 28.8
ClCG00G005620 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.8e-17 94.4 317 26.5
ClCG06G011820 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.8e-17 94.4 317 26.5
MELO3C033167.2 Cucumis melo HOM05D000877 ORTHO05D001339 1.8e-17 94.4 87 47.1
ClCG03G010370 Citrullus lanatus HOM05D009184 ORTHO05D001339 3.9e-17 93.2 167 32.9
ClCG05G012190 Citrullus lanatus HOM05D007588 ORTHO05D001339 5.1e-17 92.8 94 39.4
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-17 92.8 177 30.5
Prupe.4G281000 Prunus persica HOM05D002180 ORTHO05D001339 5.1e-17 92.8 165 29.1
Sed0007767 Sechium edule HOM05D007588 ORTHO05D001339 8.8e-17 92.0 307 24.8
Sed0008115 Sechium edule HOM05D007588 ORTHO05D001339 8.8e-17 92.0 108 37.0
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-16 91.3 200 25.5
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-16 91.3 180 30.6
ClCG00G004030 Citrullus lanatus HOM05D009184 ORTHO05D001339 2.0e-16 90.9 247 26.7
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-16 90.9 228 25.9
Sed0021777 Sechium edule HOM05D007588 ORTHO05D001339 2.0e-16 90.9 99 42.4
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-16 90.5 202 29.7
ClCG07G006510 Citrullus lanatus HOM05D009184 ORTHO05D000001 4.3e-16 89.7 220 30.0
ClCG10G006620 Citrullus lanatus HOM05D007588 ORTHO05D001339 5.7e-16 89.4 58 62.1
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-16 89.4 206 30.6
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-16 88.6 209 25.4
Lju41A59G27 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-16 88.6 191 29.8
Lj6P572T28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-15 88.2 161 28.6
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.7e-15 87.8 154 29.9
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-15 87.4 284 22.2
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-15 87.4 206 30.1
MELO3C032040.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.8e-15 87.0 83 53.0
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-15 87.0 177 29.9
Sed0013444 Sechium edule HOM05D007588 ORTHO05D001339 2.8e-15 87.0 264 26.9
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-15 86.7 188 26.1
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-15 86.7 170 27.1
ClCG04G001010 Citrullus lanatus HOM05D009184 ORTHO05D015610 4.8e-15 86.3 101 39.6
ClCG06G009830 Citrullus lanatus HOM05D009184 ORTHO05D015610 4.8e-15 86.3 130 32.3
Lju1295C2G0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-15 86.3 128 32.0
MELO3C004097.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.3e-15 85.9 108 39.8
MELO3C004723.2 Cucumis melo HOM05D007588 ORTHO05D001339 6.3e-15 85.9 118 39.8
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 8.2e-15 85.5 180 29.4
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-14 85.1 186 24.7
ClCG01G016460 Citrullus lanatus HOM05D009184 ORTHO05D001339 1.4e-14 84.7 102 39.2
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-14 84.0 171 29.2
MELO3C029873.2 Cucumis melo HOM05D007588 ORTHO05D001339 3.1e-14 83.6 58 56.9
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 3.1e-14 83.6 204 27.0
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 4.1e-14 83.2 155 28.4
ClCG03G011420 Citrullus lanatus HOM05D009184 ORTHO05D001339 4.1e-14 83.2 174 29.9
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-14 83.2 172 30.8
Lj2A800T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.2e-13 81.6 190 25.8
ClCG03G017440 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.5e-13 81.3 64 53.1
CsaV3_6G041450 Cucumis sativus L. HOM05D007588 ORTHO05D001339 1.5e-13 81.3 122 41.0
Lj3C276T1 Lonicera japonica HOM05D009066 ORTHO05D001339 2.0e-13 80.9 154 28.6
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-13 80.5 131 29.8
PSO832G0078 Papaver somniferum HOM05D002180 ORTHO05D001339 2.6e-13 80.5 159 29.6
ClCG10G007440 Citrullus lanatus HOM05D000003 ORTHO05D000004 3.4e-13 80.1 149 28.9
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-13 79.0 210 24.8
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 7.7e-13 79.0 225 27.6
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.3e-12 78.2 144 28.5
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-12 77.4 194 27.3
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-12 77.4 165 26.7
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-12 77.4 122 34.4
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-12 77.0 194 26.8
Lj8A607T65 Lonicera japonica HOM05D002180 ORTHO05D001339 2.9e-12 77.0 227 25.1
Lj6A393T51 Lonicera japonica HOM05D002180 ORTHO05D001339 5.0e-12 76.3 188 24.5
Lj8C523G12 Lonicera japonica HOM05D002180 ORTHO05D001339 8.5e-12 75.5 142 26.8
Sed0017408 Sechium edule HOM05D007588 ORTHO05D001339 8.5e-12 75.5 210 25.7
Sed0008385 Sechium edule HOM05D007588 ORTHO05D001339 1.4e-11 74.7 143 32.2
Lj1C6T4 Lonicera japonica HOM05D009066 ORTHO05D001339 5.5e-11 72.8 212 24.5
CsaV3_2G008180 Cucumis sativus L. HOM05D007588 ORTHO05D001339 7.2e-11 72.4 90 47.8
Lj1C335T7 Lonicera japonica HOM05D009066 ORTHO05D001339 7.2e-11 72.4 258 25.6
CANSAT21G1376 Cannabis sativa HOM05D002180 ORTHO05D001339 1.2e-10 71.6 188 22.9
Lj5C563G0 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-10 71.2 204 22.1
ClCG04G003160 Citrullus lanatus HOM05D002427 ORTHO05D002818 2.1e-10 70.9 100 32.0
Lj3C635T12 Lonicera japonica HOM05D002180 ORTHO05D001339 2.1e-10 70.9 176 31.8
Sed0000745 Sechium edule HOM05D007588 ORTHO05D001339 2.1e-10 70.9 202 28.7
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-10 70.5 228 25.0
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-10 70.5 167 26.9
ClCG08G003110 Citrullus lanatus HOM05D007588 ORTHO05D001339 6.1e-10 69.3 67 40.3
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-10 68.9 90 34.4
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-10 68.9 147 29.3
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-09 68.6 170 27.1
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-09 68.2 149 27.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-09 67.8 134 27.6
MELO3C029369.2 Cucumis melo HOM05D007588 ORTHO05D001339 2.3e-09 67.4 101 37.6
Lj6P216T13 Lonicera japonica HOM05D002180 ORTHO05D001339 2.3e-09 67.4 158 25.3
Sed0010098 Sechium edule HOM05D007588 ORTHO05D001339 3.9e-09 66.6 151 31.8
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-09 66.2 85 40.0
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.1e-08 65.1 233 25.3
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.1e-08 65.1 121 31.4
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 1.5e-08 64.7 87 31.0
Lj5C672T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.0e-08 64.3 210 25.7
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 2.6e-08 63.9 87 35.6
Nn2g13826 Nelumbo nucifera HOM05D011113 ORTHO05D001339 2.6e-08 63.9 143 30.1
PSO017G7198 Papaver somniferum HOM05D002180 ORTHO05D001339 2.6e-08 63.9 114 28.9
MELO3C012892.2 Cucumis melo HOM05D007588 ORTHO05D001339 4.4e-08 63.2 120 30.8
Lj6C285T4 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.8 215 25.6
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.8 111 29.7
PSO210G7745 Papaver somniferum HOM05D002180 ORTHO05D001339 5.7e-08 62.8 144 27.8
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 5.7e-08 62.8 66 40.9
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.7e-08 62.8 66 40.9
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.7e-08 62.8 66 40.9
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 5.7e-08 62.8 66 40.9
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 9.7e-08 62.0 68 38.2
ClCG06G010890 Citrullus lanatus HOM05D014232 ORTHO05D001339 1.3e-07 61.6 121 31.4
Lj6A103G46 Lonicera japonica HOM05D002180 ORTHO05D001339 2.2e-07 60.8 118 25.4
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 2.2e-07 60.8 121 31.4
Lju50A23T25 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-07 60.5 243 23.9
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-07 60.1 83 31.3
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 59.7 108 32.4
Lj7P489T18 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 59.7 119 25.2
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 59.7 84 35.7
Lj2C42T4 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-07 59.3 86 31.4
Lj3C921G6 Lonicera japonica HOM05D002180 ORTHO05D001339 8.2e-07 58.9 214 28.0
ClCG07G007130 Citrullus lanatus HOM05D007588 ORTHO05D001339 1.1e-06 58.5 61 44.3
Sed0000711 Sechium edule HOM05D048706 ORTHO05D001339 1.1e-06 58.5 139 30.2
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 1.1e-06 58.5 71 38.0
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-06 58.5 71 38.0
Nn4g26617 Nelumbo nucifera HOM05D011113 ORTHO05D001339 1.4e-06 58.2 89 32.6
Nitab4.5_0000108g0180 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.4e-06 58.2 147 26.5
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-06 57.8 87 31.0
Lj5P610T17 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-06 57.4 115 27.8
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.1e-06 57.0 88 36.4
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.1e-06 57.0 88 36.4
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-06 56.2 109 30.3
Medtr3g048390 Medicago truncatula HOM05D008558 ORTHO05D011658 7.0e-06 55.8 205 22.4
MELO3C026648.2 Cucumis melo HOM05D007588 ORTHO05D001339 9.1e-06 55.5 108 33.3
Lj3A585T50 Lonicera japonica HOM05D002180 ORTHO05D001339 9.1e-06 55.5 70 34.3
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 9.1e-06 55.5 98 32.7


User provided reference genes

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