Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000329.2 Cucumis melo HOM05D001595 ORTHO05D001573 1.1e-59 233.0 112 100.0
Sed0014305 Sechium edule HOM05D001595 ORTHO05D001573 4.1e-14 81.6 107 44.9
Sed0013155 Sechium edule HOM05D001595 ORTHO05D001573 1.2e-13 80.1 107 44.9
CsaV3_6G005210 Cucumis sativus L. HOM05D001595 ORTHO05D001573 8.5e-12 73.9 109 41.3
ClCG08G007020 Citrullus lanatus HOM05D001595 ORTHO05D001573 1.5e-11 73.2 109 39.4
MELO3C008340.2 Cucumis melo HOM05D001595 ORTHO05D001573 9.4e-11 70.5 109 39.4
Sed0012876 Sechium edule HOM05D001595 ORTHO05D001573 1.6e-10 69.7 112 35.7
MELO3C004902.2 Cucumis melo HOM05D001595 ORTHO05D001573 4.7e-10 68.2 85 38.8
Lj3g0006531 Lotus japonicus HOM05D001595 ORTHO05D001573 6.1e-10 67.8 101 36.6
TWI79G1366 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 6.1e-10 67.8 100 33.0
MELO3C004901.2 Cucumis melo HOM05D001595 ORTHO05D001573 1.0e-09 67.0 110 35.5
Cfa002804 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.8e-09 66.2 104 39.4
Lalb_Chr08g0239061 Lupinus albus HOM05D001595 ORTHO05D001573 2.3e-09 65.9 106 34.0
Lj6g0008981 Lotus japonicus HOM05D001595 ORTHO05D001573 3.0e-09 65.5 107 34.6
CSS0020896 Camellia sinensis var. sinensis HOM05D001595 ORTHO05D001573 5.2e-09 64.7 106 32.1
CsaV3_1G013940 Cucumis sativus L. HOM05D001595 ORTHO05D001573 5.2e-09 64.7 82 40.2
Gohir.A05G144200 Gossypium hirsutum HOM05D001595 ORTHO05D001573 6.8e-09 64.3 75 41.3
Rhsim10G0143700 Rhododendron simsii HOM05D001595 ORTHO05D001573 6.8e-09 64.3 111 36.0
TAR381G0734 Trochodendron aralioides HOM05D001595 ORTHO05D001573 6.8e-09 64.3 109 35.8
TAR381G0944 Trochodendron aralioides HOM05D001595 ORTHO05D001573 6.8e-09 64.3 109 35.8
MBI19_g47477_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 8.8e-09 63.9 99 34.3
Lj6g0002778 Lotus japonicus HOM05D001595 ORTHO05D001573 1.2e-08 63.5 78 41.0
Thecc.06G138400 Theobroma cacao HOM05D001595 ORTHO05D001573 1.2e-08 63.5 103 31.1
Aqoxy5G02057 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 1.5e-08 63.2 75 37.3
Migut.C00167 Erythranthe guttata HOM05D001595 ORTHO05D001573 1.5e-08 63.2 90 35.6
Glyma.20G168300 Glycine max HOM05D001595 ORTHO05D001573 1.5e-08 63.2 103 33.0
MD10G1029400 Malus domestica HOM05D001595 ORTHO05D001573 1.5e-08 63.2 107 34.6
Psat0s3756g0040 Pisum sativum HOM05D001595 ORTHO05D001573 2.0e-08 62.8 106 36.8
VMungo0251G0665 Vigna mungo HOM05D001595 ORTHO05D001573 2.0e-08 62.8 98 34.7
Gorai.009G150400 Gossypium raimondii HOM05D001595 ORTHO05D001573 2.6e-08 62.4 75 41.3
Gorai.009G285800 Gossypium raimondii HOM05D001595 ORTHO05D001573 2.6e-08 62.4 98 31.6
Lj4P858T30 Lonicera japonica HOM05D001595 ORTHO05D001573 2.6e-08 62.4 103 35.0
QL10p018395 Quercus lobata HOM05D001595 ORTHO05D001573 2.6e-08 62.4 101 34.7
RcHm_v2.0_Chr6g0284701 Rosa chinensis HOM05D001595 ORTHO05D001573 2.6e-08 62.4 76 40.8
ClCG01G013540 Citrullus lanatus HOM05D001595 ORTHO05D001573 3.4e-08 62.0 74 37.8
DCAR_001408 Daucus carota HOM05D001595 ORTHO05D001573 3.4e-08 62.0 108 36.1
FvH4_2g18910 Fragaria vesca HOM05D001595 ORTHO05D001573 3.4e-08 62.0 79 39.2
FAN24G1415 Fragaria x ananassa HOM05D001595 ORTHO05D001573 3.4e-08 62.0 79 39.2
unitig_7.g29872 Utricularia gibba HOM05D001595 ORTHO05D001573 3.4e-08 62.0 108 35.2
unitig_748.g8664 Utricularia gibba HOM05D001595 ORTHO05D001573 3.4e-08 62.0 108 35.2
VMungo0540G1199 Vigna mungo HOM05D001595 ORTHO05D001573 3.4e-08 62.0 104 31.7
Ciclev10003810m.g Citrus clementina HOM05D001595 ORTHO05D001573 4.4e-08 61.6 110 32.7
Duzib116G0136 Durio zibethinus HOM05D001595 ORTHO05D001573 4.4e-08 61.6 104 32.7
Migut.C00168 Erythranthe guttata HOM05D001595 ORTHO05D001573 4.4e-08 61.6 90 34.4
PSO170G5457 Papaver somniferum HOM05D001595 ORTHO05D001573 4.4e-08 61.6 119 26.1
PGR044G0324 Punica granatum HOM05D001595 ORTHO05D001573 4.4e-08 61.6 113 31.9
Gohir.A05G270700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 5.7e-08 61.2 98 30.6
Nn1g00645 Nelumbo nucifera HOM05D001595 ORTHO05D001573 5.7e-08 61.2 77 37.7
PSO017G1258 Papaver somniferum HOM05D001595 ORTHO05D001573 5.7e-08 61.2 79 38.0
PSO063G2756 Papaver somniferum HOM05D001595 ORTHO05D001573 5.7e-08 61.2 79 38.0
Prupe.8G031900 Prunus persica HOM05D001595 ORTHO05D001573 5.7e-08 61.2 76 38.2
Prupe.8G032300 Prunus persica HOM05D001595 ORTHO05D001573 5.7e-08 61.2 76 38.2
Duzib235G1226 Durio zibethinus HOM05D001595 ORTHO05D001573 7.5e-08 60.8 103 32.0
Gohir.D05G272700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 7.5e-08 60.8 98 30.6
RcHm_v2.0_Chr6g0274951 Rosa chinensis HOM05D001595 ORTHO05D001573 7.5e-08 60.8 109 33.0
FvH4_2g13390 Fragaria vesca HOM05D001595 ORTHO05D001573 9.8e-08 60.5 96 36.5
FvH4_2g13400 Fragaria vesca HOM05D001595 ORTHO05D001573 9.8e-08 60.5 96 36.5
Glyma.09G195200 Glycine max HOM05D001595 ORTHO05D001573 9.8e-08 60.5 103 34.0
Prupe.8G034800 Prunus persica HOM05D001595 ORTHO05D001573 9.8e-08 60.5 75 37.3
Dinv25879 Davidia involucrata HOM05D001595 ORTHO05D001573 1.3e-07 60.1 111 36.9
FAN24G0780 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.3e-07 60.1 96 36.5
Nn3g16635 Nelumbo nucifera HOM05D001595 ORTHO05D001573 1.3e-07 60.1 68 39.7
PSO801G0676 Papaver somniferum HOM05D001595 ORTHO05D001573 1.3e-07 60.1 78 38.5
Phvul.006G037100 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 1.3e-07 60.1 104 31.7
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.7e-07 59.7 76 39.5
Glyma.04G164700 Glycine max HOM05D001595 ORTHO05D001573 1.7e-07 59.7 103 33.0
TWI60G0213 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 1.7e-07 59.7 76 36.8
FAN27G1224 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.2e-07 59.3 78 35.9
Gohir.D05G146600 Gossypium hirsutum HOM05D001595 ORTHO05D001573 2.2e-07 59.3 75 40.0
PSO017G3093 Papaver somniferum HOM05D001595 ORTHO05D001573 2.2e-07 59.3 79 35.4
PSO782G4789 Papaver somniferum HOM05D001595 ORTHO05D001573 2.2e-07 59.3 79 36.7
Phvul.003G272700 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 2.2e-07 59.3 102 33.3
QL10p018379 Quercus lobata HOM05D001595 ORTHO05D001573 2.2e-07 59.3 75 37.3
RcHm_v2.0_Chr6g0284691 Rosa chinensis HOM05D001595 ORTHO05D001573 2.2e-07 59.3 114 33.3
Atru.chr13.2076 Acer truncatum HOM05D001595 ORTHO05D001573 2.8e-07 58.9 110 32.7
Ca_14639_v3 Cicer arietinum L. HOM05D001595 ORTHO05D001573 2.8e-07 58.9 105 34.3
DCAR_001403 Daucus carota HOM05D001595 ORTHO05D001573 2.8e-07 58.9 76 38.2
FAN20G0442 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.8e-07 58.9 110 34.5
PSO063G4001 Papaver somniferum HOM05D001595 ORTHO05D001573 2.8e-07 58.9 111 32.4
Cfa002803 Carpinus fangiana HOM05D001595 ORTHO05D001573 3.7e-07 58.5 68 36.8
CiPaw.04G087400 Carya illinoinensis HOM05D001595 ORTHO05D001573 3.7e-07 58.5 115 31.3
CDE02G2450 Ceratophyllum demersum HOM05D001595 ORTHO05D001573 3.7e-07 58.5 76 34.2
DCAR_027561 Daucus carota HOM05D000076 ORTHO05D001377 3.7e-07 58.5 79 38.0
PSO017G6837 Papaver somniferum HOM05D001595 ORTHO05D001573 3.7e-07 58.5 79 36.7
Cpa.g.sc49.104 Carica papaya HOM05D001595 ORTHO05D001573 4.8e-07 58.2 69 37.7
PSO170G4482 Papaver somniferum HOM05D001595 ORTHO05D001573 4.8e-07 58.2 119 35.3
TPR.G858 Trifolium pratense HOM05D001595 ORTHO05D001573 4.8e-07 58.2 105 32.4
FAN08G1743 Fragaria x ananassa HOM05D001595 ORTHO05D001573 6.3e-07 57.8 78 34.6
FAN15G2959 Fragaria x ananassa HOM05D001595 ORTHO05D001573 6.3e-07 57.8 109 33.0
FAN18G2357 Fragaria x ananassa HOM05D002706 ORTHO05D003253 6.3e-07 57.8 76 34.2
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.3e-07 57.8 75 38.7
Potri.001G353600 Populus trichocarpa HOM05D001595 ORTHO05D001573 6.3e-07 57.8 106 32.1
Prupe.I003300 Prunus persica HOM05D001595 ORTHO05D001573 6.3e-07 57.8 111 30.6
RcHm_v2.0_Chr7g0197601 Rosa chinensis HOM05D001595 ORTHO05D001573 6.3e-07 57.8 110 33.6
AL4G11010 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 8.3e-07 57.4 110 29.1
AT2G21740 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 8.3e-07 57.4 103 29.1
FAN04G2420 Fragaria x ananassa HOM05D001595 ORTHO05D001573 8.3e-07 57.4 76 34.2
FAN13G2138 Fragaria x ananassa HOM05D001595 ORTHO05D001573 8.3e-07 57.4 76 34.2
Potri.001G306700 Populus trichocarpa HOM05D001595 ORTHO05D001573 8.3e-07 57.4 76 38.2
Rhsim08G0004100 Rhododendron simsii HOM05D001595 ORTHO05D001573 8.3e-07 57.4 101 34.7
Sopen04g027630 Solanum pennellii HOM05D001595 ORTHO05D001573 8.3e-07 57.4 64 37.5
Haze_27442 Corylus avellana HOM05D001595 ORTHO05D001573 1.1e-06 57.0 106 31.1
ECA247G3848 Erigeron canadensis HOM05D001595 ORTHO05D001573 1.1e-06 57.0 68 35.3
Hma1.2p1_3414F.1_g335920 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 1.1e-06 57.0 102 31.4
Lj5g0011167 Lotus japonicus HOM05D001595 ORTHO05D001573 1.1e-06 57.0 109 30.3
TPR.G8467 Trifolium pratense HOM05D001595 ORTHO05D001573 1.1e-06 57.0 101 31.7
CAN.G264.6 Capsicum annuum HOM05D001595 ORTHO05D001573 1.4e-06 56.6 64 35.9
Cfa018309 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.4e-06 56.6 65 36.9
CiPaw.16G010800 Carya illinoinensis HOM05D001595 ORTHO05D001573 1.4e-06 56.6 97 35.1
AUR62006156 Chenopodium quinoa HOM05D001595 ORTHO05D001573 1.4e-06 56.6 80 35.0
HanXRQChr12g0378011 Helianthus annuus HOM05D001595 ORTHO05D001573 1.4e-06 56.6 88 33.0
Hma1.2p1_1625F.1_g294300 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 1.4e-06 56.6 102 31.4
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.4e-06 56.6 114 32.5
Oeu012712.1 Olea europaea HOM05D001595 ORTHO05D001573 1.4e-06 56.6 106 30.2
QL11p027894 Quercus lobata HOM05D001595 ORTHO05D001573 1.4e-06 56.6 104 32.7
Sabra16G0192900 Salix brachista HOM05D001595 ORTHO05D001573 1.4e-06 56.6 107 35.5
SalBow7G4086 Salvia bowleyana HOM05D001595 ORTHO05D001573 1.4e-06 56.6 77 35.1
PSO210G6253 Papaver somniferum HOM05D001595 ORTHO05D001573 1.8e-06 56.2 119 33.6
PSO782G3363 Papaver somniferum HOM05D001595 ORTHO05D001573 1.8e-06 56.2 122 32.8
QL06p031123 Quercus lobata HOM05D001595 ORTHO05D001573 1.8e-06 56.2 104 34.6
Thecc.01G118600 Theobroma cacao HOM05D001595 ORTHO05D001573 1.8e-06 56.2 104 32.7
AL2G36900 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 2.4e-06 55.8 119 32.8
AT1G76750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 2.4e-06 55.8 111 35.1
Carub.0002s2366 Capsella rubella HOM05D001595 ORTHO05D001573 2.4e-06 55.8 105 34.3
CiPaw.04G087500 Carya illinoinensis HOM05D001595 ORTHO05D001573 2.4e-06 55.8 76 38.2
Cc07_g16880 Coffea canephora HOM05D001595 ORTHO05D001573 2.4e-06 55.8 64 37.5
FvH4_5g02500 Fragaria vesca HOM05D001595 ORTHO05D001573 2.4e-06 55.8 117 29.9
Glyma.06G199900 Glycine max HOM05D001595 ORTHO05D001573 2.4e-06 55.8 103 32.0
PSO170G3144 Papaver somniferum HOM05D001595 ORTHO05D001573 2.4e-06 55.8 119 34.5
PSO478G4628 Papaver somniferum HOM05D001595 ORTHO05D001573 2.4e-06 55.8 68 35.3
PSO675G1185 Papaver somniferum HOM05D001595 ORTHO05D001573 2.4e-06 55.8 121 32.2
PGR042G0959 Punica granatum HOM05D001595 ORTHO05D001573 2.4e-06 55.8 87 32.2
SalBow7G2484 Salvia bowleyana HOM05D001595 ORTHO05D001573 2.4e-06 55.8 112 32.1
Aqoxy4G02324 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 3.1e-06 55.5 113 31.0
CAN.G516.7 Capsicum annuum HOM05D001595 ORTHO05D001573 3.1e-06 55.5 76 35.5
AUR62017034 Chenopodium quinoa HOM05D001595 ORTHO05D001573 3.1e-06 55.5 114 33.3
Medtr8g099500 Medicago truncatula HOM05D001595 ORTHO05D001573 3.1e-06 55.5 105 33.3
GSVIVG01022286001 Vitis vinifera HOM05D001595 ORTHO05D001573 3.1e-06 55.5 91 34.1
Aqoxy2G02018 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 4.1e-06 55.1 65 38.5
EL10Ac8g20404 Beta vulgaris HOM05D001595 ORTHO05D001573 4.1e-06 55.1 65 38.5
CiPaw.04G087600 Carya illinoinensis HOM05D001595 ORTHO05D001573 4.1e-06 55.1 104 34.6
HanXRQChr15g0486621 Helianthus annuus HOM05D001595 ORTHO05D001573 4.1e-06 55.1 68 33.8
Lsat_1_v5_gn_1_6241 Lactuca sativa HOM05D001595 ORTHO05D001573 4.1e-06 55.1 110 30.9
Nn1g06066 Nelumbo nucifera HOM05D001595 ORTHO05D001573 4.1e-06 55.1 117 32.5
Nitab4.5_0001187g0010 Nicotiana tabacum HOM05D001595 ORTHO05D001573 4.1e-06 55.1 108 26.9
TPR.G13564 Trifolium pratense HOM05D001595 ORTHO05D001573 4.1e-06 55.1 100 30.0
TPR.G3442 Trifolium pratense HOM05D001595 ORTHO05D001573 4.1e-06 55.1 104 32.7
Aqoxy2G00733 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 5.4e-06 54.7 68 35.3
BcaB02g07121 Brassica carinata HOM05D001595 ORTHO05D001573 5.4e-06 54.7 116 32.8
AUR62019334 Chenopodium quinoa HOM05D001595 ORTHO05D001573 5.4e-06 54.7 80 33.8
Manes.12G150100 Manihot esculenta HOM05D001595 ORTHO05D001573 5.4e-06 54.7 91 31.9
Nitab4.5_0001582g0120 Nicotiana tabacum HOM05D001595 ORTHO05D001573 5.4e-06 54.7 114 33.3
Nitab4.5_0002138g0050 Nicotiana tabacum HOM05D001595 ORTHO05D001573 5.4e-06 54.7 69 36.2
PSO478G1785 Papaver somniferum HOM05D001595 ORTHO05D001573 5.4e-06 54.7 68 35.3
PSO675G8159 Papaver somniferum HOM05D001595 ORTHO05D001573 5.4e-06 54.7 122 32.0
PGSC0003DMG400003995 Solanum tuberosum HOM05D001595 ORTHO05D001573 5.4e-06 54.7 77 36.4
THA.LOC104812034 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 5.4e-06 54.7 110 30.9
Migut.L00051 Erythranthe guttata HOM05D001595 ORTHO05D001573 7.0e-06 54.3 106 33.0
MBI17_g24511_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 7.0e-06 54.3 66 37.9
MBI17_g24664_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 7.0e-06 54.3 66 37.9
Psat5g183680 Pisum sativum HOM05D001595 ORTHO05D001573 7.0e-06 54.3 106 30.2
PGSC0003DMG400006658 Solanum tuberosum HOM05D001595 ORTHO05D001573 7.0e-06 54.3 118 28.8
SGA_v2.0_scaffold4G02142 Striga asiatica HOM05D001595 ORTHO05D001573 7.0e-06 54.3 121 29.8
CARHR070290 Cardamine hirsuta HOM05D001595 ORTHO05D001573 9.1e-06 53.9 108 34.3
Duzib187G0218 Durio zibethinus HOM05D001595 ORTHO05D001573 9.1e-06 53.9 106 33.0
Nitab4.5_0001344g0030 Nicotiana tabacum HOM05D001595 ORTHO05D001573 9.1e-06 53.9 102 29.4
PSO675G3376 Papaver somniferum HOM05D001595 ORTHO05D001573 9.1e-06 53.9 113 33.6
TAR628G0448 Trochodendron aralioides HOM05D001595 ORTHO05D001573 9.1e-06 53.9 103 29.1


User provided reference genes

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