Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C000121.2 Cucumis melo HOM05D000256 ORTHO05D000119 8.4e-65 250.4 141 100.0
MELO3C023040.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.0e-30 137.1 79 87.3
MELO3C027840.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.8e-27 126.3 66 93.9
MELO3C027895.2 Cucumis melo HOM05D000256 ORTHO05D000119 6.9e-27 124.4 66 92.4
MELO3C031156.2 Cucumis melo HOM05D000256 ORTHO05D000119 4.5e-26 121.7 66 90.9
MELO3C028151.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.2e-25 119.4 66 90.9
ClCG06G007550 Citrullus lanatus HOM05D000256 ORTHO05D000119 1.1e-19 100.5 69 72.5
MELO3C031190.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.0e-18 96.3 65 78.5
C08p01330 Brassica napus HOM05D000256 ORTHO05D000119 9.7e-13 77.4 66 45.5
BolC8t46937H Brassica oleracea HOM05D000256 ORTHO05D000119 1.3e-12 77.0 66 47.0
A08p36790 Brassica napus HOM05D000256 ORTHO05D000119 6.3e-12 74.7 66 45.5
MELO3C027965.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.1e-11 72.4 42 88.1
ClCG10G008200 Citrullus lanatus HOM05D000256 ORTHO05D000119 7.0e-11 71.2 49 61.2
BolC8t46941H Brassica oleracea HOM05D000256 ORTHO05D000119 2.6e-10 69.3 65 44.6
C08p01260 Brassica napus HOM05D000256 ORTHO05D000119 1.0e-09 67.4 65 44.6
BolC8t46933H Brassica oleracea HOM05D000214 ORTHO05D000131 1.3e-09 67.0 65 44.6
C08p01280 Brassica napus HOM05D000256 ORTHO05D000119 1.1e-08 63.9 65 41.5
BolC8t46935H Brassica oleracea HOM05D000256 ORTHO05D000119 1.1e-08 63.9 65 41.5
MELO3C027808.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.1e-08 63.9 71 43.7
C08p01360 Brassica napus HOM05D000256 ORTHO05D000119 1.9e-08 63.2 65 43.1
BcaB03g13479 Brassica carinata HOM05D000256 ORTHO05D000119 3.2e-08 62.4 65 41.5
BcaC07g36891 Brassica carinata HOM05D000256 ORTHO05D000119 3.2e-08 62.4 46 52.2
BolC8t46945H Brassica oleracea HOM05D000256 ORTHO05D000119 3.2e-08 62.4 65 43.1
MELO3C000712.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.2e-08 62.4 76 44.7
MELO3C028622.2 Cucumis melo HOM05D000256 ORTHO05D000119 3.2e-08 62.4 70 44.3
BcaC07g36897 Brassica carinata HOM05D000256 ORTHO05D000119 4.2e-08 62.0 47 48.9
BcaC07g36898 Brassica carinata HOM05D000256 ORTHO05D000119 5.5e-08 61.6 64 43.8
AT1G04645 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 7.2e-08 61.2 45 55.6
A08p36830 Brassica napus HOM05D000256 ORTHO05D000119 7.2e-08 61.2 65 40.0
C08p01300 Brassica napus HOM05D000256 ORTHO05D000119 7.2e-08 61.2 65 40.0
BolC8t46936H Brassica oleracea HOM05D000256 ORTHO05D000119 7.2e-08 61.2 65 40.0
BraA08t35584Z Brassica rapa HOM05D000256 ORTHO05D000119 7.2e-08 61.2 65 40.0
BolC8t46939H Brassica oleracea HOM05D000256 ORTHO05D000119 9.4e-08 60.8 65 40.0
BraA08t35582Z Brassica rapa HOM05D000256 ORTHO05D000119 9.4e-08 60.8 39 56.4
MELO3C028732.2 Cucumis melo HOM05D000256 ORTHO05D000119 9.4e-08 60.8 70 42.9
Carub.0001s0389 Capsella rubella HOM05D000256 ORTHO05D000119 1.2e-07 60.5 46 52.2
AL1G14350 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.6e-07 60.1 46 54.3
MELO3C001002.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.6e-07 60.1 70 41.4
MELO3C027647.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.6e-07 60.1 70 41.4
MELO3C028734.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.6e-07 60.1 76 43.4
MELO3C028737.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.1e-07 59.7 70 42.9
MELO3C028140.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.7e-07 59.3 70 41.4
MELO3C028733.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.7e-07 59.3 70 41.4
CsaV3_4G030240 Cucumis sativus L. HOM05D000256 ORTHO05D000119 2.7e-07 59.3 70 42.9
A08p36810 Brassica napus HOM05D000256 ORTHO05D000119 3.6e-07 58.9 41 53.7
PGR044G0923 Punica granatum HOM05D000256 ORTHO05D000119 6.1e-07 58.2 52 51.9
CsaV3_4G030180 Cucumis sativus L. HOM05D012710 ORTHO05D014596 8.0e-07 57.8 70 41.4
CsaV3_4G030190 Cucumis sativus L. HOM05D000256 ORTHO05D000119 8.0e-07 57.8 70 41.4
CsaV3_4G030220 Cucumis sativus L. HOM05D015375 ORTHO05D017892 8.0e-07 57.8 76 42.1
BraA09t42107Z Brassica rapa HOM05D000256 ORTHO05D000119 1.4e-06 57.0 52 50.0
MELO3C027686.2 Cucumis melo HOM05D000256 ORTHO05D000119 1.4e-06 57.0 59 44.1
Sc13g0002860 Simmondsia chinensis HOM05D000256 ORTHO05D000119 1.4e-06 57.0 48 52.1
A09p67760 Brassica napus HOM05D000256 ORTHO05D000119 2.3e-06 56.2 75 42.7
Thhalv10015241m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.0e-06 55.8 70 42.9
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 3.0e-06 55.8 78 44.9
C08p52090 Brassica napus HOM05D000256 ORTHO05D000119 4.0e-06 55.5 75 41.3
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 6.7e-06 54.7 70 41.4
BolC8t52742H Brassica oleracea HOM05D000256 ORTHO05D000119 6.7e-06 54.7 75 41.3
Prupe.8G012700 Prunus persica HOM05D000256 ORTHO05D000119 6.7e-06 54.7 48 50.0
Sc13g0002840 Simmondsia chinensis HOM05D000256 ORTHO05D000119 8.8e-06 54.3 71 42.3


User provided reference genes

Program Settings