Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.8e-64 248.4 124 100.0
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 8.5e-37 157.1 90 90.0
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 3.1e-31 138.7 89 80.9
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 4.7e-27 124.8 90 73.3
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.7e-27 124.8 90 73.3
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 4.7e-27 124.8 90 73.3
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 8.0e-27 124.0 90 72.2
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 1.4e-26 123.2 90 66.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 4.0e-26 121.7 75 81.3
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.3e-25 118.6 87 72.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 5.7e-25 117.9 89 65.2
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 7.5e-25 117.5 76 71.1
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 1.3e-24 116.7 97 62.9
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 1.7e-24 116.3 81 69.1
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 2.8e-24 115.5 81 66.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 3.7e-24 115.2 76 72.4
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 4.8e-24 114.8 78 69.2
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 6.3e-24 114.4 77 68.8
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 6.3e-24 114.4 75 73.3
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 6.3e-24 114.4 75 70.7
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 6.3e-24 114.4 80 70.0
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.4e-23 112.5 76 68.4
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 2.4e-23 112.5 87 64.4
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.1e-23 112.1 76 69.7
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 7.0e-23 110.9 74 68.9
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.2e-22 110.2 97 58.8
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 1.2e-22 110.2 80 63.8
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 1.6e-22 109.8 95 55.8
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.6e-22 109.8 94 56.4
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 4.5e-22 108.2 84 61.9
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.0e-21 107.1 76 63.2
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.0e-21 107.1 76 63.2
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 1.0e-21 107.1 80 62.5
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 1.3e-21 106.7 81 59.3
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.3e-21 106.7 72 70.8
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 1.7e-21 106.3 80 63.8
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.7e-21 106.3 72 66.7
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.7e-21 106.3 84 59.5
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 1.7e-21 106.3 75 70.7
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 2.2e-21 105.9 80 63.8
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.9e-21 105.5 76 61.8
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 5.0e-21 104.8 81 58.0
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 5.0e-21 104.8 81 58.0
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 5.0e-21 104.8 84 58.3
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 5.0e-21 104.8 72 63.9
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 6.5e-21 104.4 73 67.1
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.5e-21 104.4 73 67.1
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 6.5e-21 104.4 77 61.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.1e-20 103.6 81 60.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.1e-20 103.6 90 54.4
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 1.9e-20 102.8 76 61.8
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 3.2e-20 102.1 75 62.7
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 3.2e-20 102.1 76 61.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 4.2e-20 101.7 73 65.8
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.5e-20 101.3 80 58.8
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.5e-20 101.3 80 57.5
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 7.2e-20 100.9 77 59.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 9.4e-20 100.5 80 56.2
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.2e-19 100.1 76 60.5
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.2e-19 100.1 73 64.4
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.6e-19 99.8 73 63.0
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 2.1e-19 99.4 73 63.0
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 2.7e-19 99.0 80 57.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 3.6e-19 98.6 83 56.6
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 3.6e-19 98.6 76 59.2
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 4.7e-19 98.2 76 60.5
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 8.0e-19 97.4 73 61.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 1.0e-18 97.1 74 56.8
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.0e-18 97.1 74 56.8
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 1.0e-18 97.1 73 60.3
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.8e-18 96.3 74 56.8
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.8e-18 96.3 74 56.8
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 2.3e-18 95.9 73 58.9
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 2.3e-18 95.9 73 57.5
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.3e-18 95.9 73 58.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 3.0e-18 95.5 76 59.2
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 3.0e-18 95.5 74 56.8
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.0e-18 95.5 73 56.2
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 4.0e-18 95.1 73 58.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 4.0e-18 95.1 66 66.7
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 5.2e-18 94.7 72 63.9
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 5.2e-18 94.7 62 69.4
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 5.2e-18 94.7 76 60.5
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 8.8e-18 94.0 74 55.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 2.6e-17 92.4 81 50.6
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.6e-17 92.4 71 54.9
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.6e-17 92.4 72 56.9
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 7.5e-17 90.9 81 58.0
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 7.5e-17 90.9 73 57.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 9.8e-17 90.5 72 54.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 9.8e-17 90.5 66 68.2
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 1.3e-16 90.1 72 52.8
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.7e-16 89.7 73 60.3
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.7e-16 89.7 78 55.1
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.7e-16 89.7 66 65.2
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.2e-16 89.4 73 53.4
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.2e-16 89.4 73 53.4
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-16 89.4 73 53.4
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 2.2e-16 89.4 73 53.4
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.2e-16 89.4 66 65.2
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 2.8e-16 89.0 66 63.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 3.7e-16 88.6 59 71.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 3.7e-16 88.6 66 63.6
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 6.3e-16 87.8 66 63.6
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 2.4e-15 85.9 74 55.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 3.1e-15 85.5 76 57.9
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.7e-13 79.7 93 46.2
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.2e-11 73.6 79 51.9
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 9.2e-07 57.4 74 40.5


User provided reference genes

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