Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1252600 Malus domestica HOM05D006849 ORTHO05D003348 1.3e-76 289.7 145 100.0
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 1.1e-19 100.5 144 40.3
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 1.8e-17 93.2 127 37.0
RcHm_v2.0_Chr5g0066571 Rosa chinensis HOM05D006849 ORTHO05D003348 1.6e-15 86.7 145 32.4
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.8e-15 85.9 135 34.1
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 6.3e-15 84.7 125 36.0
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 9.0e-14 80.9 125 36.0
FAN21G2011 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.0e-13 79.7 133 32.3
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 7.7e-13 77.8 92 44.6
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.7e-12 76.6 133 31.6
RcHm_v2.0_Chr1g0320331 Rosa chinensis HOM05D006849 ORTHO05D003348 2.2e-12 76.3 81 42.0
RcHm_v2.0_Chr5g0035621 Rosa chinensis HOM05D006849 ORTHO05D003348 2.2e-12 76.3 82 42.7
RcHm_v2.0_Chr5g0063301 Rosa chinensis HOM05D006849 ORTHO05D003348 2.2e-12 76.3 81 42.0
FAN01G0657 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.9e-12 75.9 92 43.5
FAN01G3000 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.9e-12 75.9 92 43.5
RcHm_v2.0_Chr4g0413141 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-12 75.5 113 34.5
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-12 75.5 128 32.8
RcHm_v2.0_Chr5g0053321 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-12 75.5 93 37.6
FvH4_2g06412 Fragaria vesca HOM05D006849 ORTHO05D003348 5.0e-12 75.1 125 32.8
FAN14G0390 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.5e-12 74.7 68 50.0
RcHm_v2.0_Chr6g0262741 Rosa chinensis HOM05D006849 ORTHO05D003348 2.5e-11 72.8 82 41.5
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.2e-11 72.4 116 35.3
RcHm_v2.0_Chr7g0212031 Rosa chinensis HOM05D006849 ORTHO05D003348 3.2e-11 72.4 81 42.0
Potri.003G004401 Populus trichocarpa HOM05D006849 ORTHO05D003348 5.5e-11 71.6 91 38.5
FvH4_2g08146 Fragaria vesca HOM05D007856 ORTHO05D003348 7.2e-11 71.2 92 43.5
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 9.4e-11 70.9 121 35.5
FAN22G1474 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.4e-11 70.9 102 37.3
FvH4_3g10141 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-10 70.5 81 40.7
FvH4_7g08311 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-10 70.5 81 40.7
FvH4_7g18891 Fragaria vesca HOM05D007856 ORTHO05D003348 1.2e-10 70.5 81 40.7
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.6e-10 70.1 77 41.6
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 2.1e-10 69.7 132 32.6
FAN16G3654 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.6e-10 68.9 91 41.8
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 6.1e-10 68.2 108 33.3
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.1e-10 68.2 77 42.9
Potri.019G061550 Populus trichocarpa HOM05D006849 ORTHO05D003348 6.1e-10 68.2 91 37.4
MD07G1084700 Malus domestica HOM05D006849 ORTHO05D003348 1.8e-09 66.6 136 27.2
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 2.3e-09 66.2 130 28.5
FAN19G3137 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.3e-09 66.2 101 37.6
FAN16G1404 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.7e-09 64.7 86 36.0
RcHm_v2.0_Chr2g0122381 Rosa chinensis HOM05D006849 ORTHO05D003348 6.7e-09 64.7 82 35.4
FvH4_4g22470 Fragaria vesca HOM05D006849 ORTHO05D003348 1.1e-08 63.9 76 38.2
Potri.001G165480 Populus trichocarpa HOM05D018388 ORTHO05D003348 1.5e-08 63.5 86 34.9
FAN24G0953 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.3e-08 62.4 91 39.6
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.4e-08 61.2 120 30.0
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 9.7e-08 60.8 120 29.2
FAN24G3491 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-07 60.5 80 35.0
MD02G1253200 Malus domestica HOM05D037583 ORTHO05D003348 1.3e-07 60.5 109 30.3
MD02G1254000 Malus domestica HOM05D037583 ORTHO05D003348 1.3e-07 60.5 109 30.3
MD14G1159700 Malus domestica HOM05D006849 ORTHO05D003348 1.7e-07 60.1 120 31.7
RcHm_v2.0_Chr2g0133331 Rosa chinensis HOM05D006849 ORTHO05D003348 2.8e-07 59.3 91 30.8
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.8e-07 58.5 118 28.8
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 4.8e-07 58.5 148 29.7
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.3e-07 58.2 118 28.8
FAN10G4353 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.1e-06 57.4 129 27.1
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.4e-06 57.0 91 35.2
FvH4_5g26612 Fragaria vesca HOM05D007856 ORTHO05D003348 1.8e-06 56.6 110 30.0
RcHm_v2.0_Chr2g0174211 Rosa chinensis HOM05D006849 ORTHO05D003348 3.1e-06 55.8 82 39.0
FAN17G1070 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.1e-06 55.5 77 39.0
FAN04G0160 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.3e-06 55.1 86 31.4
RcHm_v2.0_Chr5g0050871 Rosa chinensis HOM05D006849 ORTHO05D003348 9.1e-06 54.3 60 40.0


User provided reference genes

Program Settings