Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.6e-200 701.8 351 100.0
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.4e-172 609.8 351 86.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 6.8e-148 527.7 345 77.4
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 1.2e-147 526.9 346 76.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 5.7e-147 524.6 337 74.5
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 9.8e-147 523.9 346 74.6
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.7e-144 515.8 339 74.9
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.3e-143 512.7 343 72.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 9.5e-142 507.3 332 75.0
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 2.8e-141 505.8 340 72.4
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.6e-141 505.4 349 71.9
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 6.1e-141 504.6 344 71.5
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.3e-140 502.7 346 73.7
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 4.0e-140 501.9 344 71.8
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 6.8e-140 501.1 347 72.3
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.6e-139 499.2 346 72.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.4e-139 498.8 331 73.7
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 6.3e-138 494.6 335 72.8
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.4e-137 492.7 346 70.2
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.2e-137 492.3 346 70.5
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 3.2e-137 492.3 332 72.3
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 1.6e-136 490.0 362 68.5
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.7e-136 489.2 346 69.9
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 3.9e-135 485.3 342 71.6
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 3.9e-135 485.3 345 71.6
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.9e-135 485.3 336 69.3
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 3.9e-135 485.3 344 69.8
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 6.6e-135 484.6 332 72.3
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 3.3e-134 482.3 336 69.3
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 7.3e-134 481.1 332 72.6
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 8.0e-133 477.6 336 69.0
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.8e-132 476.5 313 74.4
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 4.0e-132 475.3 332 69.3
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 8.9e-132 474.2 334 68.0
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.0e-131 473.0 321 72.6
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 4.4e-131 471.9 326 72.4
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 5.8e-131 471.5 354 66.7
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 1.7e-130 469.9 319 71.2
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 2.2e-130 469.5 325 72.0
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 2.9e-130 469.2 319 70.8
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 2.9e-130 469.2 319 70.8
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.9e-130 469.2 344 68.6
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 2.9e-130 469.2 332 70.8
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.2e-129 465.7 326 70.2
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 5.4e-129 464.9 349 66.8
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 4.6e-128 461.8 318 73.3
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 4.6e-128 461.8 345 67.5
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 1.7e-127 459.9 336 66.4
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 8.6e-127 457.6 351 66.1
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.9e-126 456.4 350 63.4
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 4.7e-125 451.8 333 68.2
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 6.2e-125 451.4 368 64.4
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.1e-124 450.7 323 67.8
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.8e-124 449.9 335 66.6
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 2.0e-123 446.4 349 65.3
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 4.4e-123 445.3 337 65.6
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.7e-122 442.2 333 67.9
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.7e-122 442.2 333 67.9
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 4.9e-122 441.8 310 67.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.9e-122 441.8 349 64.2
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 2.4e-121 439.5 331 65.9
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 2.4e-121 439.5 313 67.1
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 5.4e-121 438.3 324 67.3
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 1.2e-120 437.2 331 65.3
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.6e-120 436.8 331 65.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 2.1e-120 436.4 330 65.5
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 4.6e-120 435.3 329 65.3
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.3e-119 433.7 330 65.2
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.9e-119 432.2 315 66.3
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.4e-116 423.7 345 64.3
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.3e-116 422.9 310 65.5
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 3.1e-116 422.5 336 66.4
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 9.9e-115 417.5 292 72.6
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 2.9e-114 416.0 337 62.9
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 6.4e-114 414.8 309 66.7
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 1.1e-113 414.1 289 71.3
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 1.0e-111 407.5 315 63.8
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 6.6e-111 404.8 308 65.9
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 2.1e-109 399.8 291 68.0
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.8e-109 399.4 286 67.5
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 6.6e-103 378.3 250 75.2
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 8.7e-103 377.9 327 61.8
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 3.1e-100 369.4 309 61.8
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.4e-97 360.5 249 70.3
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 2.1e-96 356.7 333 56.2
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 9.6e-94 347.8 225 76.0
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 2.1e-88 330.1 302 53.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 3.4e-83 312.8 321 55.1
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.2e-82 310.1 333 51.4
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 6.0e-80 302.0 304 52.3
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.3e-79 300.8 206 70.4
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 5.1e-79 298.9 213 68.5
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 5.7e-78 295.4 318 46.9
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-74 284.6 314 51.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 5.1e-71 272.3 221 62.0
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 7.7e-67 258.5 196 65.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.1e-62 244.6 332 42.5
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 2.2e-58 230.3 170 68.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 2.9e-58 229.9 356 36.2
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 7.9e-56 221.9 258 43.8
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.9e-50 203.4 318 40.3
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 5.7e-46 189.1 214 50.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 8.5e-42 175.3 198 49.0
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 5.7e-38 162.5 131 60.3
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.0e-35 154.1 122 66.4
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 1.3e-34 151.4 90 81.1
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 4.2e-33 146.4 102 71.6
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.2e-32 144.8 89 78.7
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 4.7e-32 142.9 117 59.0
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 1.4e-31 141.4 91 78.0
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 2.8e-29 133.7 346 29.5
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 1.9e-25 120.9 101 58.4
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.0e-23 115.2 284 30.6
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 6.8e-23 112.5 135 45.2
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 8.1e-08 62.4 302 25.2
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 1.4e-07 61.6 30 80.0
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 1.8e-07 61.2 77 48.1
TWI12G0975 Tripterygium wilfordii HOM05D000916 ORTHO05D007921 3.1e-07 60.5 307 26.4
arahy.Tifrunner.gnm1.ann1.G72GGE Arachis hypogaea HOM05D000916 ORTHO05D007921 8.9e-07 58.9 302 26.2
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 3.4e-06 57.0 86 33.7
Cpa.g.sc2.285 Carica papaya HOM05D000224 ORTHO05D002442 4.4e-06 56.6 110 36.4
AUR62017447 Chenopodium quinoa HOM05D000916 ORTHO05D007921 4.4e-06 56.6 305 27.2
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 5.8e-06 56.2 292 24.7
Psat6g112920 Pisum sativum HOM05D000916 ORTHO05D007921 5.8e-06 56.2 297 24.6
AUR62032516 Chenopodium quinoa HOM05D000916 ORTHO05D007921 7.5e-06 55.8 291 27.8
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 7.5e-06 55.8 86 33.7
MSTRG.25473 Avicennia marina HOM05D000916 ORTHO05D007921 9.8e-06 55.5 302 25.5
Lalb_Chr02g0149821 Lupinus albus HOM05D000916 ORTHO05D007921 9.8e-06 55.5 292 23.6


User provided reference genes

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