Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 1.1e-73 280.0 150 100.0
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 1.5e-43 179.9 153 68.0
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 6.2e-34 147.9 148 58.8
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 6.0e-29 131.3 121 58.7
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 8.7e-28 127.5 147 52.4
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 9.6e-27 124.0 141 53.2
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 1.1e-25 120.6 95 68.4
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.1e-25 120.6 143 53.1
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.2e-24 117.1 151 51.0
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 1.7e-23 113.2 147 51.0
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 2.2e-23 112.8 142 53.5
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 2.2e-23 112.8 141 48.9
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.9e-23 112.5 121 55.4
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 3.8e-23 112.1 142 50.7
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 8.4e-23 110.9 147 49.7
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.9e-22 109.8 121 53.7
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.6e-21 106.7 141 49.6
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 2.1e-21 106.3 142 49.3
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 4.6e-21 105.1 144 49.3
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 2.3e-20 102.8 154 46.8
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 1.5e-19 100.1 145 46.2
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 1.5e-19 100.1 146 43.8
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 1.9e-19 99.8 154 44.2
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 5.7e-19 98.2 146 44.5
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 7.4e-19 97.8 107 55.1
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 9.7e-19 97.4 116 53.4
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 1.6e-18 96.7 145 41.4
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 2.8e-18 95.9 98 52.0
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 1.4e-17 93.6 118 47.5
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 1.8e-17 93.2 145 42.1
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 1.2e-16 90.5 145 42.1
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 2.6e-16 89.4 145 44.1
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 5.9e-16 88.2 145 40.0
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 1.0e-15 87.4 100 50.0
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 2.2e-15 86.3 149 41.6
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 6.5e-15 84.7 146 39.0
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 2.5e-14 82.8 144 40.3
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 5.5e-14 81.6 74 55.4
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 5.5e-14 81.6 120 40.8
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 7.2e-14 81.3 133 40.6
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 7.2e-14 81.3 133 40.6
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 1.2e-13 80.5 125 41.6
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 1.6e-13 80.1 111 42.3
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 2.7e-13 79.3 142 41.5
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 3.6e-13 79.0 90 51.1
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 3.6e-13 79.0 144 36.8
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 4.6e-13 78.6 133 40.6
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 4.6e-13 78.6 133 40.6
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 4.6e-13 78.6 133 40.6
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 4.6e-13 78.6 120 41.7
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 4.6e-13 78.6 79 54.4
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 4.6e-13 78.6 153 35.3
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.8e-12 76.6 60 63.3
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 2.3e-12 76.3 145 38.6
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 3.0e-12 75.9 61 65.6
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 3.0e-12 75.9 81 51.9
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 3.0e-12 75.9 103 47.6
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 3.0e-12 75.9 108 44.4
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 3.9e-12 75.5 107 43.0
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 5.1e-12 75.1 59 66.1
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 6.7e-12 74.7 78 59.0
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 1.1e-11 73.9 78 51.3
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 1.1e-11 73.9 149 33.6
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 1.1e-11 73.9 150 40.0
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 1.5e-11 73.6 85 50.6
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 1.5e-11 73.6 85 50.6
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 2.5e-11 72.8 67 50.7
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 3.3e-11 72.4 92 45.7
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 4.3e-11 72.0 103 41.7
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 5.7e-11 71.6 112 38.4
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 7.4e-11 71.2 59 61.0
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 9.7e-11 70.9 96 44.8
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 1.3e-10 70.5 118 39.0
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 1.3e-10 70.5 114 41.2
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 1.7e-10 70.1 63 58.7
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 2.2e-10 69.7 125 37.6
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 2.8e-10 69.3 85 49.4
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 2.8e-10 69.3 92 43.5
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 2.8e-10 69.3 56 67.9
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 4.8e-10 68.6 65 50.8
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 6.3e-10 68.2 55 69.1
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 8.2e-10 67.8 58 62.1
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 8.2e-10 67.8 91 44.0
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 1.1e-09 67.4 91 42.9
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 1.4e-09 67.0 79 44.3
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 1.4e-09 67.0 83 50.6
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 1.8e-09 66.6 61 52.5
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 2.4e-09 66.2 81 40.7
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 5.3e-09 65.1 93 40.9
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 5.3e-09 65.1 66 53.0
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 2.6e-08 62.8 90 40.0
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 2.6e-08 62.8 59 52.5
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 3.4e-08 62.4 97 39.2
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.7e-07 60.1 48 62.5
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.1e-06 57.4 52 53.8
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 1.4e-06 57.0 65 52.3
QL05p030704 Quercus lobata HOM05D007527 ORTHO05D009523 2.5e-06 56.2 84 42.9


User provided reference genes

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