Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1198900 Malus domestica HOM05D002035 ORTHO05D002032 1.7e-93 345.9 167 100.0
COL.COLO4_30316 Corchorus olitorius HOM05D002035 ORTHO05D002032 2.6e-20 102.8 54 74.1
CiPaw.01G241400 Carya illinoinensis HOM05D002035 ORTHO05D002032 4.4e-20 102.1 94 52.1
Prupe.3G075500 Prunus persica HOM05D002035 ORTHO05D002032 8.2e-19 97.8 93 55.9
Nn2g11853 Nelumbo nucifera HOM05D002035 ORTHO05D002032 1.4e-18 97.1 76 56.6
Gorai.009G131700 Gossypium raimondii HOM05D002035 ORTHO05D002032 2.4e-18 96.3 85 48.2
Gohir.D05G127600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 3.1e-18 95.9 79 50.6
CSS0016789 Camellia sinensis var. sinensis HOM05D002035 ORTHO05D002032 1.2e-17 94.0 77 50.6
Lj9A505T67 Lonicera japonica HOM05D002035 ORTHO05D002032 3.5e-17 92.4 85 50.6
Gohir.A05G126700 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.0e-16 90.9 85 44.7
Atru.chr1.3215 Acer truncatum HOM05D002035 ORTHO05D002032 1.3e-16 90.5 92 44.6
Thecc.06G081100 Theobroma cacao HOM05D002035 ORTHO05D002032 2.9e-16 89.4 85 48.2
Lj7A639T57 Lonicera japonica HOM05D002035 ORTHO05D002032 6.5e-16 88.2 94 43.6
Ciclev10026432m.g Citrus clementina HOM05D002035 ORTHO05D002032 1.9e-15 86.7 84 50.0
Lj5A64T49 Lonicera japonica HOM05D002035 ORTHO05D002032 1.9e-15 86.7 48 66.7
ClCG09G002410 Citrullus lanatus HOM05D002035 ORTHO05D002032 5.5e-15 85.1 76 48.7
Duzib192G0363 Durio zibethinus HOM05D002035 ORTHO05D002032 5.5e-15 85.1 56 55.4
Sabra03G0033200 Salix brachista HOM05D002035 ORTHO05D002032 9.4e-15 84.3 96 46.9
Aqoxy7G01891 Aquilegia oxysepala HOM05D002035 ORTHO05D002032 1.6e-14 83.6 70 52.9
Potri.003G057700 Populus trichocarpa HOM05D002035 ORTHO05D002032 1.6e-14 83.6 93 48.4
QL05p025724 Quercus lobata HOM05D002035 ORTHO05D002032 2.7e-14 82.8 84 48.8
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 3.6e-14 82.4 46 67.4
Manes.04G120300 Manihot esculenta HOM05D002035 ORTHO05D002032 6.1e-14 81.6 91 46.2
DCAR_011278 Daucus carota HOM05D002035 ORTHO05D002032 8.0e-14 81.3 99 40.4
Potri.001G176800 Populus trichocarpa HOM05D002035 ORTHO05D002032 8.0e-14 81.3 84 48.8
Actinidia08824 Actinidia chinensis HOM05D002035 ORTHO05D002032 1.0e-13 80.9 89 43.8
Sed0022414 Sechium edule HOM05D002035 ORTHO05D002032 1.8e-13 80.1 90 45.6
DCAR_021322 Daucus carota HOM05D002035 ORTHO05D002032 4.0e-13 79.0 76 46.1
PSO063G6019 Papaver somniferum HOM05D002035 ORTHO05D002032 4.0e-13 79.0 79 44.3
TWI12G0998 Tripterygium wilfordii HOM05D002035 ORTHO05D002032 8.8e-13 77.8 74 43.2
FvH4_6g30802 Fragaria vesca HOM05D002035 ORTHO05D002032 9.7e-12 74.3 63 50.8
Atru.chr1.3214 Acer truncatum HOM05D002035 ORTHO05D002032 1.3e-11 73.9 48 54.2
CAN.G438.100 Capsicum annuum HOM05D002035 ORTHO05D002032 8.2e-11 71.2 74 41.9
VMungo0331G0720 Vigna mungo HOM05D002035 ORTHO05D002032 1.8e-10 70.1 55 49.1
FvH4_6g30801 Fragaria vesca HOM05D002035 ORTHO05D002032 3.1e-10 69.3 63 46.0
Manes.11G050600 Manihot esculenta HOM05D002035 ORTHO05D002032 3.1e-10 69.3 93 43.0
Atru.chr1.3213 Acer truncatum HOM05D002035 ORTHO05D002032 7.0e-10 68.2 50 56.0
QL06p001256 Quercus lobata HOM05D011240 ORTHO05D002032 9.1e-10 67.8 79 43.0
Lj3g0011923 Lotus japonicus HOM05D002035 ORTHO05D002032 1.6e-09 67.0 79 40.5
FAN14G5962 Fragaria x ananassa HOM05D002035 ORTHO05D002032 4.5e-09 65.5 63 44.4
Solyc03g119900.4 Solanum lycopersicum HOM05D002035 ORTHO05D002032 4.5e-09 65.5 66 47.0
Sopen03g038780 Solanum pennellii HOM05D002035 ORTHO05D002032 4.5e-09 65.5 66 47.0
Peaxi162Scf00015g00535 Petunia axillaris HOM05D002035 ORTHO05D002032 1.0e-08 64.3 48 52.1
Phvul.010G152100 Phaseolus vulgaris HOM05D002035 ORTHO05D002032 1.0e-08 64.3 87 37.9
Psat7g253600 Pisum sativum HOM05D002035 ORTHO05D002032 1.0e-08 64.3 88 38.6
TPR.G27503 Trifolium pratense HOM05D002035 ORTHO05D002032 1.0e-08 64.3 64 37.5
Glyma.07G033900 Glycine max HOM05D002035 ORTHO05D002032 1.3e-08 63.9 47 48.9
Glyma.08G208200 Glycine max HOM05D002035 ORTHO05D002032 1.3e-08 63.9 88 38.6
Thecc.09G117000 Theobroma cacao HOM05D002035 ORTHO05D002032 1.3e-08 63.9 93 39.8
DCAR_027239 Daucus carota HOM05D002035 ORTHO05D002032 1.7e-08 63.5 84 41.7
Sabra10G0060600 Salix brachista HOM05D002035 ORTHO05D002032 2.2e-08 63.2 77 36.4
Phvul.007G277600 Phaseolus vulgaris HOM05D002035 ORTHO05D002032 3.8e-08 62.4 66 42.4
Migut.I00835 Erythranthe guttata HOM05D002035 ORTHO05D002032 5.0e-08 62.0 47 48.9
arahy.Tifrunner.gnm1.ann1.D6QP22 Arachis hypogaea HOM05D002035 ORTHO05D002032 6.5e-08 61.6 56 46.4
arahy.Tifrunner.gnm1.ann1.KCS4U6 Arachis hypogaea HOM05D002035 ORTHO05D002032 6.5e-08 61.6 56 46.4
ECA247G0414 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.5e-08 61.6 74 40.5
BcaB04g18257 Brassica carinata HOM05D002035 ORTHO05D002032 8.5e-08 61.2 60 45.0
CAN.G1402.15 Capsicum annuum HOM05D002035 ORTHO05D002032 8.5e-08 61.2 91 35.2
MBI05_g12591_MAGBIO Magnolia biondii HOM05D002035 ORTHO05D002032 1.1e-07 60.8 80 42.5
MD16G1198500 Malus domestica HOM05D002035 ORTHO05D002032 1.1e-07 60.8 88 35.2
arahy.Tifrunner.gnm1.ann1.B6YHT2 Arachis hypogaea HOM05D002035 ORTHO05D002032 1.5e-07 60.5 81 35.8
Migut.N00207 Erythranthe guttata HOM05D002035 ORTHO05D002032 1.5e-07 60.5 80 40.0
Gohir.A08G240401 Gossypium hirsutum HOM05D002035 ORTHO05D002032 1.5e-07 60.5 66 37.9
Lj6g0008601 Lotus japonicus HOM05D002035 ORTHO05D002032 1.5e-07 60.5 56 44.6
MD13G1198400 Malus domestica HOM05D002035 ORTHO05D002032 1.5e-07 60.5 89 34.8
Phvul.007G061100 Phaseolus vulgaris HOM05D002035 ORTHO05D002032 1.9e-07 60.1 75 36.0
Psat6g104040 Pisum sativum HOM05D002035 ORTHO05D002032 1.9e-07 60.1 81 38.3
PGSC0003DMG400006454 Solanum tuberosum HOM05D002035 ORTHO05D002032 1.9e-07 60.1 85 36.5
VMungo0720G0605 Vigna mungo HOM05D002035 ORTHO05D002032 1.9e-07 60.1 67 40.3
Cfa008455 Carpinus fangiana HOM05D002035 ORTHO05D002032 2.5e-07 59.7 84 34.5
ECA234G2382 Erigeron canadensis HOM05D002035 ORTHO05D002032 2.5e-07 59.7 49 38.8
MBI11_g35356_MAGBIO Magnolia biondii HOM05D002035 ORTHO05D002032 2.5e-07 59.7 65 41.5
GSVIVG01018031001 Vitis vinifera HOM05D002035 ORTHO05D002032 2.5e-07 59.7 85 40.0
Glyma.02G004800 Glycine max HOM05D002035 ORTHO05D002032 3.2e-07 59.3 83 33.7
HanXRQChr04g0106661 Helianthus annuus HOM05D002035 ORTHO05D002032 4.2e-07 58.9 75 41.3
Lalb_Chr03g0037431 Lupinus albus HOM05D002035 ORTHO05D002032 4.2e-07 58.9 56 42.9
Solyc09g082570.3 Solanum lycopersicum HOM05D002035 ORTHO05D002032 4.2e-07 58.9 103 34.0
HanXRQChr02g0045141 Helianthus annuus HOM05D002035 ORTHO05D002032 5.5e-07 58.5 84 35.7
Nitab4.5_0001046g0030 Nicotiana tabacum HOM05D002035 ORTHO05D002032 5.5e-07 58.5 69 40.6
Gohir.D08G261001 Gossypium hirsutum HOM05D002035 ORTHO05D047795 7.2e-07 58.2 46 43.5
Gorai.004G279100 Gossypium raimondii HOM05D002035 ORTHO05D047795 7.2e-07 58.2 46 43.5
A08p11430 Brassica napus HOM05D002035 ORTHO05D002032 9.4e-07 57.8 83 34.9
CiPaw.07G065300 Carya illinoinensis HOM05D002035 ORTHO05D002032 9.4e-07 57.8 76 43.4
PGR102G2476 Punica granatum HOM05D002035 ORTHO05D002032 9.4e-07 57.8 100 43.0
BcaC07g37847 Brassica carinata HOM05D002035 ORTHO05D002032 1.2e-06 57.4 60 41.7
Os11g0582000 Oryza sativa ssp. japonica HOM05D002035 ORTHO05D002032 1.2e-06 57.4 48 45.8
Sed0020511 Sechium edule HOM05D002035 ORTHO05D002032 1.2e-06 57.4 55 45.5
QL06p001291 Quercus lobata HOM05D002035 ORTHO05D002032 1.6e-06 57.0 78 35.9
FAN22G2357 Fragaria x ananassa HOM05D002035 ORTHO05D002032 2.1e-06 56.6 55 41.8
Sp7g12860 Schrenkiella parvula HOM05D002035 ORTHO05D002032 2.1e-06 56.6 84 33.3
THA.LOC104803053 Tarenaya hassleriana HOM05D002035 ORTHO05D002032 2.1e-06 56.6 77 37.7
Thhalv10026216m.g Eutrema salsugineum HOM05D002035 ORTHO05D002032 2.7e-06 56.2 80 32.5
Lsat_1_v5_gn_1_7181 Lactuca sativa HOM05D002035 ORTHO05D002032 2.7e-06 56.2 50 44.0
Carub.0007s2740 Capsella rubella HOM05D002035 ORTHO05D002032 3.6e-06 55.8 60 38.3
Ca_12159_v3 Cicer arietinum L. HOM05D002035 ORTHO05D002032 3.6e-06 55.8 56 39.3
FvH4_4g00650 Fragaria vesca HOM05D002035 ORTHO05D002032 3.6e-06 55.8 55 41.8
Gohir.A09G218600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 3.6e-06 55.8 78 33.3
Gorai.010G068000 Gossypium raimondii HOM05D002035 ORTHO05D002032 3.6e-06 55.8 89 30.3
Nitab4.5_0013051g0010 Nicotiana tabacum HOM05D002035 ORTHO05D002032 3.6e-06 55.8 94 31.9
Sopen09g031430 Solanum pennellii HOM05D002035 ORTHO05D002032 3.6e-06 55.8 94 35.1
THA.LOC104823419 Tarenaya hassleriana HOM05D002035 ORTHO05D002032 3.6e-06 55.8 77 37.7
CANSAT78G1868 Cannabis sativa HOM05D002035 ORTHO05D002032 4.7e-06 55.5 55 40.0
Cc03_g04200 Coffea canephora HOM05D002035 ORTHO05D002032 4.7e-06 55.5 89 33.7
Dinv14038 Davidia involucrata HOM05D002035 ORTHO05D002032 4.7e-06 55.5 86 33.7
FvH4_4g01001 Fragaria vesca HOM05D002035 ORTHO05D002032 4.7e-06 55.5 55 41.8
FAN17G2404 Fragaria x ananassa HOM05D002035 ORTHO05D002032 4.7e-06 55.5 55 41.8
FAN22G1248 Fragaria x ananassa HOM05D002035 ORTHO05D002032 4.7e-06 55.5 55 41.8
Gohir.D06G057900 Gossypium hirsutum HOM05D002035 ORTHO05D002032 4.7e-06 55.5 81 30.9
Eucgr.B00933 Eucalyptus grandis HOM05D002035 ORTHO05D002032 6.1e-06 55.1 55 41.8
Gohir.D09G220900 Gossypium hirsutum HOM05D002035 ORTHO05D002032 6.1e-06 55.1 78 33.3
Gorai.006G241900 Gossypium raimondii HOM05D002035 ORTHO05D002032 6.1e-06 55.1 78 33.3
Hma1.2p1_0549F.1_g176920 Hydrangea macrophylla HOM05D002035 ORTHO05D002032 6.1e-06 55.1 55 41.8
Potri.008G156800 Populus trichocarpa HOM05D002035 ORTHO05D002032 6.1e-06 55.1 78 33.3
TPR.G25193 Trifolium pratense HOM05D002035 ORTHO05D002032 6.1e-06 55.1 82 36.6
CDE10G1332 Ceratophyllum demersum HOM05D002035 ORTHO05D002032 8.0e-06 54.7 49 42.9
Medtr1g041410 Medicago truncatula HOM05D002035 ORTHO05D002032 8.0e-06 54.7 56 42.9
Prupe.1G020200 Prunus persica HOM05D002035 ORTHO05D002032 8.0e-06 54.7 83 37.3


User provided reference genes

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