Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 5.6e-68 260.8 128 100.0
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.3e-43 177.6 96 86.5
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.0e-32 143.7 113 64.6
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 6.5e-32 141.0 142 52.8
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.1e-31 140.2 85 78.8
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.9e-31 139.4 113 62.8
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 3.2e-31 138.7 110 63.6
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 3.2e-31 138.7 110 64.5
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 7.2e-31 137.5 133 54.9
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.2e-30 136.7 112 64.3
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 2.7e-30 135.6 115 61.7
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.7e-30 135.6 113 61.1
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 3.6e-30 135.2 110 62.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 4.7e-30 134.8 133 54.1
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 4.7e-30 134.8 133 54.1
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 4.7e-30 134.8 115 62.6
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 4.7e-30 134.8 115 58.3
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.8e-29 132.9 110 58.2
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 3.0e-29 132.1 110 60.0
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 3.0e-29 132.1 109 60.6
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 3.9e-29 131.7 110 60.9
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 5.1e-29 131.3 112 58.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 6.7e-29 131.0 115 60.0
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 8.8e-29 130.6 110 59.1
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.1e-28 130.2 114 57.0
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.1e-28 130.2 110 58.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 1.1e-28 130.2 110 60.0
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.0e-28 129.4 109 58.7
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 3.3e-28 128.6 110 60.0
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.4e-28 128.3 109 58.7
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 4.4e-28 128.3 108 58.3
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 5.7e-28 127.9 109 60.6
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 5.7e-28 127.9 110 60.0
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 5.7e-28 127.9 109 58.7
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 5.7e-28 127.9 109 58.7
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 5.7e-28 127.9 109 58.7
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 5.7e-28 127.9 109 58.7
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 7.4e-28 127.5 114 60.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 9.7e-28 127.1 109 56.9
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 9.7e-28 127.1 109 60.6
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 9.7e-28 127.1 109 58.7
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-27 126.7 114 57.0
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.3e-27 126.7 107 59.8
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.2e-27 125.9 110 58.2
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 3.7e-27 125.2 109 58.7
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 3.7e-27 125.2 109 56.9
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 4.8e-27 124.8 110 56.4
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 4.8e-27 124.8 109 56.9
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.3e-27 124.4 109 58.7
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 8.2e-27 124.0 111 57.7
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 8.2e-27 124.0 110 56.4
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.1e-26 123.6 109 56.0
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.4e-26 123.2 110 55.5
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.4e-26 122.5 110 56.4
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 2.4e-26 122.5 114 56.1
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 3.1e-26 122.1 109 57.8
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 3.1e-26 122.1 109 56.0
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 3.1e-26 122.1 113 55.8
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 5.3e-26 121.3 109 56.9
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 5.3e-26 121.3 116 55.2
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 7.0e-26 120.9 110 57.3
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 9.1e-26 120.6 109 55.0
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 7.7e-25 117.5 111 53.2
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.7e-24 116.3 116 55.2
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.7e-24 116.3 111 52.3
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 6.5e-24 114.4 111 50.5
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.5e-24 114.0 116 54.3
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 8.5e-24 114.0 107 54.2
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.1e-23 113.6 109 54.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.2e-23 111.7 63 82.5
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.6e-22 109.8 96 57.3
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.6e-22 109.8 122 52.5
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.0e-21 105.1 109 50.5
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 5.2e-21 104.8 109 51.4
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 8.8e-21 104.0 105 50.5
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 8.8e-21 104.0 109 51.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 1.1e-20 103.6 107 49.5
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.5e-20 103.2 113 47.8
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 7.4e-20 100.9 109 50.5
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 9.7e-20 100.5 105 47.6
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.4e-18 96.7 56 78.6
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.4e-18 96.7 108 48.1
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 1.8e-18 96.3 105 46.7
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.8e-18 96.3 108 49.1
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 3.1e-18 95.5 60 73.3
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 9.1e-18 94.0 56 71.4
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.6e-17 93.2 55 76.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.6e-17 93.2 113 44.2
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.0e-16 90.5 56 71.4
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.2e-16 89.4 55 70.9
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 9.4e-15 84.0 95 48.4
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 2.1e-14 82.8 114 41.2
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 3.7e-11 72.0 60 56.7
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.2e-08 62.8 82 41.5
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 3.6e-06 55.5 30 80.0
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.7e-06 55.1 28 82.1
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 8.0e-06 54.3 78 44.9


User provided reference genes

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