Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 1.1e-59 233.0 116 100.0
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 2.6e-27 125.6 71 85.9
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 9.1e-25 117.1 71 81.7
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.9e-23 112.1 72 79.2
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.9e-22 109.4 72 76.4
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.9e-22 109.4 72 76.4
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 5.5e-22 107.8 71 74.6
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 5.5e-22 107.8 71 74.6
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.6e-21 106.3 72 76.4
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.7e-21 105.5 85 64.7
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 4.7e-21 104.8 71 76.1
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.4e-20 103.2 71 73.2
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.8e-20 102.8 72 73.6
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.8e-20 102.8 72 72.2
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.0e-20 102.1 72 69.4
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 4.0e-20 101.7 71 73.2
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 4.0e-20 101.7 71 73.2
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.2e-20 101.3 66 77.3
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.2e-19 100.1 71 71.8
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.6e-19 99.0 71 67.6
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 3.4e-19 98.6 72 66.7
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.3e-18 96.7 72 66.7
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 1.7e-18 96.3 72 66.7
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.8e-18 94.7 71 67.6
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.8e-18 94.7 71 67.6
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.8e-18 94.7 71 67.6
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 8.3e-18 94.0 72 66.7
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.4e-17 93.2 71 69.0
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 5.3e-17 91.3 72 63.9
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 7.0e-17 90.9 72 61.1
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 9.1e-17 90.5 72 61.1
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 9.1e-17 90.5 72 62.5
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.2e-16 90.1 74 58.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.6e-16 89.7 72 63.9
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.0e-16 89.4 71 63.4
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 3.5e-16 88.6 71 63.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 3.5e-16 88.6 71 64.8
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 4.5e-16 88.2 70 64.3
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 5.9e-16 87.8 64 68.8
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 7.7e-16 87.4 75 62.7
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 7.7e-16 87.4 72 59.7
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 7.7e-16 87.4 61 72.1
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.0e-15 87.0 72 61.1
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.3e-15 86.7 72 62.5
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 1.3e-15 86.7 72 58.3
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.7e-15 86.3 73 57.5
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.2e-15 85.9 72 62.5
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 2.2e-15 85.9 57 71.9
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 2.2e-15 85.9 73 61.6
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 2.9e-15 85.5 72 59.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 5.0e-15 84.7 72 58.3
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 5.0e-15 84.7 72 59.7
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 5.0e-15 84.7 72 59.7
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 6.5e-15 84.3 69 63.8
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 6.5e-15 84.3 62 64.5
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 6.5e-15 84.3 85 55.3
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 6.5e-15 84.3 62 67.7
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.1e-14 83.6 72 59.7
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.5e-14 83.2 72 59.7
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.5e-14 83.2 62 64.5
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.9e-14 82.8 72 58.3
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 2.5e-14 82.4 75 57.3
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 3.2e-14 82.0 75 57.3
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.2e-14 82.0 73 54.8
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 4.2e-14 81.6 46 80.4
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 5.5e-14 81.3 72 58.3
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 5.5e-14 81.3 64 65.6
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 7.2e-14 80.9 72 58.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 9.4e-14 80.5 72 55.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 2.7e-13 79.0 66 56.1
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 2.7e-13 79.0 66 56.1
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 2.7e-13 79.0 66 56.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 6.1e-13 77.8 48 75.0
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 1.0e-12 77.0 75 57.3
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.4e-12 76.6 61 62.3
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 3.0e-12 75.5 57 66.7
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.2e-11 73.6 70 52.9
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 1.5e-11 73.2 53 66.0
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 5.7e-11 71.2 54 61.1
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 9.8e-11 70.5 61 57.4
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 9.8e-11 70.5 59 61.0
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.7e-10 69.7 71 56.3
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 2.2e-10 69.3 55 61.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.8e-10 68.9 68 54.4
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 3.7e-10 68.6 71 57.7
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.8e-09 66.2 46 67.4
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 4.1e-09 65.1 48 62.5
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 9.1e-09 63.9 57 56.1
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 3.5e-08 62.0 79 44.3
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.5e-08 61.6 47 61.7
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.3e-07 60.1 49 57.1
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 2.3e-07 59.3 51 51.0
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 5.0e-07 58.2 35 77.1
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 8.6e-07 57.4 33 78.8
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 1.5e-06 56.6 50 48.0
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 7.2e-06 54.3 62 53.2


User provided reference genes

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