Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 2.0e-46 188.7 94 100.0
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.2e-44 181.0 91 97.8
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 3.8e-37 157.9 92 82.6
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.8e-37 157.9 92 82.6
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.8e-37 157.9 92 82.6
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 8.4e-37 156.8 88 86.4
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 80.9
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.2e-35 152.9 94 78.7
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.1e-35 152.1 94 79.8
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 4.6e-35 151.0 93 78.5
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 6.0e-35 150.6 94 77.7
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.0e-34 149.8 93 78.5
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.0e-34 149.8 94 77.7
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.3e-34 149.4 94 77.7
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.3e-34 149.4 103 73.8
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 75.5
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 75.5
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 2.3e-34 148.7 90 77.8
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 3.0e-34 148.3 94 77.7
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 3.0e-34 148.3 91 79.1
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 3.9e-34 147.9 94 77.7
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 5.1e-34 147.5 92 78.3
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 5.1e-34 147.5 94 76.6
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 6.7e-34 147.1 88 79.5
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 6.7e-34 147.1 94 76.6
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 6.7e-34 147.1 94 75.5
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 6.7e-34 147.1 88 78.4
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 76.6
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 75.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 73.4
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 73.4
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 8.7e-34 146.7 94 76.6
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.1e-33 146.4 94 73.4
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 79.5
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 2.5e-33 145.2 88 79.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 5.6e-33 144.1 94 73.4
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 5.6e-33 144.1 88 76.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.6e-33 144.1 104 70.2
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 5.6e-33 144.1 94 74.5
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 9.6e-33 143.3 88 76.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 9.6e-33 143.3 94 74.5
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 9.6e-33 143.3 94 72.3
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.3e-32 142.9 89 79.8
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 94 75.5
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 78.4
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 86 80.2
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.6e-32 142.5 94 73.4
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.1e-32 142.1 88 76.1
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 2.1e-32 142.1 88 78.4
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.8e-32 141.7 93 74.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.8e-32 141.7 93 75.3
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.7e-32 141.4 94 73.4
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 6.2e-32 140.6 85 77.6
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 8.1e-32 140.2 88 72.7
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 8.1e-32 140.2 94 72.3
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 8.1e-32 140.2 94 71.3
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.1e-31 139.8 88 77.3
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.1e-31 139.8 94 71.3
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.4e-31 139.4 94 70.2
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.4e-31 139.4 94 71.3
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 1.8e-31 139.0 86 77.9
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 2.4e-31 138.7 89 75.3
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.4e-31 138.7 88 73.9
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.1e-31 138.3 88 71.6
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 3.1e-31 138.3 90 73.3
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 3.1e-31 138.3 85 76.5
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.0e-31 137.9 89 73.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 9.0e-31 136.7 89 74.2
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 9.0e-31 136.7 89 74.2
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.2e-30 136.3 89 73.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.2e-30 136.3 89 74.2
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.2e-30 136.3 89 74.2
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.2e-30 136.3 88 75.0
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.5e-30 136.0 89 74.2
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.5e-30 136.0 89 74.2
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.5e-30 136.0 89 74.2
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.5e-30 136.0 86 76.7
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.0e-30 135.6 94 70.2
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.6e-30 135.2 86 75.6
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 5.8e-30 134.0 86 75.6
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 7.6e-30 133.7 84 78.6
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.7e-29 132.5 69 92.8
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 6.4e-29 130.6 88 70.5
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 4.2e-28 127.9 126 55.6
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 3.9e-26 121.3 69 82.6
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.3e-25 118.2 77 71.4
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 3.3e-25 118.2 78 71.8
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 4.8e-24 114.4 67 80.6
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 8.2e-24 113.6 73 71.2
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 8.2e-24 113.6 72 73.6
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.1e-23 113.2 66 83.3
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.1e-23 113.2 68 77.9
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 2.4e-23 112.1 82 67.1
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 2.4e-23 112.1 82 67.1
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 9.0e-23 110.2 73 69.9
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 2.6e-22 108.6 67 73.1
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.6e-22 108.6 71 71.8
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 4.5e-22 107.8 68 75.0
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 5.8e-22 107.5 71 67.6
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 2.2e-21 105.5 79 58.2
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 1.1e-20 103.2 65 75.4
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.2e-19 99.8 65 69.2
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 1.6e-19 99.4 88 54.5
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 6.0e-19 97.4 71 64.8
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 3.9e-18 94.7 77 58.4
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 3.3e-17 91.7 67 73.1
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 9.7e-17 90.1 65 60.0
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 8.5e-13 77.0 88 52.3
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 4.2e-12 74.7 45 71.1
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 3.6e-11 71.6 71 46.5
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 4.3e-09 64.7 70 47.1


User provided reference genes

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