Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.0e-38 162.9 81 100.0
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.3e-33 146.0 80 90.0
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 7.0e-32 140.2 79 87.3
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 2.3e-30 135.2 79 83.5
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 3.8e-30 134.4 79 83.5
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.1e-29 132.9 79 81.0
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.1e-29 132.9 79 81.0
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.5e-29 131.7 79 81.0
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-28 129.4 79 78.5
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.8e-28 128.3 79 78.5
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 8.0e-28 126.7 79 77.2
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 1.0e-27 126.3 78 76.9
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.3e-27 125.2 79 79.7
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 3.0e-27 124.8 79 75.9
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.0e-27 124.4 78 75.6
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 5.2e-27 124.0 78 76.9
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 5.2e-27 124.0 78 76.9
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 5.2e-27 124.0 78 75.6
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 6.8e-27 123.6 78 76.9
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.5e-26 122.5 79 73.4
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 2.0e-26 122.1 78 74.4
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.6e-26 121.7 79 75.9
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 4.4e-26 120.9 79 72.2
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 4.4e-26 120.9 79 73.4
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 4.4e-26 120.9 79 73.4
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 4.4e-26 120.9 80 72.5
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 5.7e-26 120.6 79 77.2
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 5.7e-26 120.6 79 74.7
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.7e-26 120.6 79 74.7
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 7.5e-26 120.2 79 73.4
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 7.5e-26 120.2 79 73.4
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.5e-26 120.2 79 73.4
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 7.5e-26 120.2 79 73.4
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 7.5e-26 120.2 78 76.9
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 9.8e-26 119.8 79 72.2
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-25 119.4 79 72.2
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.3e-25 119.4 79 72.2
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 1.3e-25 119.4 79 72.2
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.7e-25 119.0 79 73.4
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.7e-25 119.0 79 73.4
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 2.2e-25 118.6 79 73.4
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 3.7e-25 117.9 79 70.9
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 3.7e-25 117.9 79 72.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 6.4e-25 117.1 79 69.6
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 6.4e-25 117.1 79 72.2
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 6.4e-25 117.1 79 72.2
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 6.4e-25 117.1 79 72.2
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 8.3e-25 116.7 79 73.4
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.1e-24 116.3 78 73.1
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 1.4e-24 115.9 79 70.9
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.8e-24 115.5 79 69.6
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.8e-24 115.5 79 67.1
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.8e-24 115.5 79 69.6
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 2.4e-24 115.2 79 72.2
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 2.4e-24 115.2 78 69.2
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 3.2e-24 114.8 79 72.2
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.2e-24 114.8 77 72.7
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 1.2e-23 112.8 79 68.4
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 1.6e-23 112.5 79 67.1
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.6e-23 112.5 78 65.4
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 2.7e-23 111.7 79 68.4
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 4.6e-23 110.9 79 68.4
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 5.9e-23 110.5 78 66.7
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 5.9e-23 110.5 79 67.1
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 7.8e-23 110.2 79 67.1
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 7.8e-23 110.2 78 66.7
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 7.8e-23 110.2 78 66.7
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 7.8e-23 110.2 78 66.7
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.3e-22 109.4 77 67.5
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.3e-22 109.4 79 69.6
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.3e-22 109.4 79 67.1
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.7e-22 109.0 79 67.1
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 2.3e-22 108.6 79 63.3
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 3.0e-22 108.2 79 63.3
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 3.0e-22 108.2 79 64.6
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 3.9e-22 107.8 79 65.8
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 5.0e-22 107.5 79 60.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 5.0e-22 107.5 79 60.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 5.0e-22 107.5 79 62.0
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.0e-22 107.5 79 63.3
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 5.0e-22 107.5 79 65.8
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 6.6e-22 107.1 79 65.8
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 6.6e-22 107.1 79 65.8
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 8.6e-22 106.7 79 62.0
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 8.6e-22 106.7 78 62.8
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.1e-21 106.3 79 62.0
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.1e-21 106.3 79 64.6
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 1.5e-21 105.9 77 70.1
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.9e-21 105.5 79 60.8
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 3.3e-21 104.8 79 62.0
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 1.6e-20 102.4 70 71.4
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 2.1e-20 102.1 74 67.6
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 2.8e-20 101.7 79 62.0
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 2.8e-20 101.7 77 67.5
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 4.7e-20 100.9 78 64.1
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 4.7e-20 100.9 85 60.0
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 8.0e-20 100.1 78 57.7
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.3e-19 98.6 85 58.8
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 5.2e-19 97.4 89 57.3
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 2.0e-18 95.5 79 58.2
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 4.4e-18 94.4 70 64.3
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 2.9e-17 91.7 84 56.0
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 2.9e-17 91.7 62 75.8
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 1.4e-16 89.4 62 74.2
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.4e-16 88.6 103 45.6
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.6e-15 85.9 58 74.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.7e-14 82.4 77 58.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 2.3e-14 82.0 77 55.8
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 3.9e-14 81.3 75 56.0
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 3.3e-13 78.2 80 51.2
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 5.6e-13 77.4 67 56.7
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 1.6e-12 75.9 65 52.3
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.1e-12 75.5 53 73.6
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 2.8e-12 75.1 45 71.1
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.8e-12 75.1 45 71.1
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 3.6e-12 74.7 43 74.4
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 8.1e-12 73.6 54 68.5
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.8e-11 72.4 53 69.8
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 3.1e-11 71.6 80 38.8
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 4.9e-09 64.3 52 65.4
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 5.4e-08 60.8 65 36.9
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 7.1e-08 60.5 79 36.7
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 7.8e-07 57.0 64 42.2


User provided reference genes

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