Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 5.5e-105 385.2 208 100.0
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 9.8e-62 241.5 209 66.5
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 5.8e-38 162.5 203 50.7
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 4.6e-35 152.9 210 48.6
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 4.6e-35 152.9 210 48.6
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.3e-34 151.4 210 49.0
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.1e-33 148.3 211 47.9
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 2.5e-33 147.1 211 47.4
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 3.3e-25 120.2 190 39.5
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 6.9e-23 112.5 190 40.0
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 2.6e-22 110.5 227 36.6
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 3.4e-22 110.2 187 40.6
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 1.3e-21 108.2 241 34.4
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 2.2e-21 107.5 122 48.4
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 2.9e-21 107.1 185 37.3
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 2.9e-21 107.1 191 40.8
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 6.4e-21 105.9 126 47.6
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 1.4e-20 104.8 117 49.6
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 2.4e-20 104.0 153 43.1
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 3.2e-20 103.6 186 34.9
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 1.2e-19 101.7 190 35.8
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 2.1e-19 100.9 177 39.5
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 2.7e-19 100.5 129 41.9
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 2.7e-19 100.5 192 35.9
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 3.5e-19 100.1 199 36.2
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.0e-18 98.6 188 40.4
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 1.0e-18 98.6 188 40.4
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 1.0e-18 98.6 175 37.7
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 1.0e-18 98.6 130 43.1
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 1.3e-18 98.2 131 43.5
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 3.9e-18 96.7 129 43.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 3.3e-17 93.6 190 37.4
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 3.3e-17 93.6 129 40.3
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 3.3e-17 93.6 187 35.3
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 5.6e-17 92.8 132 40.2
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 7.4e-17 92.4 163 39.9
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 2.1e-16 90.9 126 42.1
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 6.2e-16 89.4 207 36.2
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 6.2e-16 89.4 169 37.9
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 1.1e-15 88.6 131 38.2
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.1e-15 88.6 173 36.4
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 2.4e-15 87.4 211 34.1
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 5.3e-15 86.3 167 33.5
MD14G1065400 Malus domestica HOM05D007281 ORTHO05D009241 9.0e-15 85.5 46 87.0
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 9.0e-15 85.5 172 36.6
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.2e-14 85.1 235 32.8
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 3.4e-14 83.6 187 34.8
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 3.4e-14 83.6 229 33.6
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 3.4e-14 83.6 122 42.6
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 3.4e-14 83.6 154 35.7
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 4.5e-14 83.2 156 37.2
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 4.5e-14 83.2 121 39.7
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 5.8e-14 82.8 123 38.2
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 5.8e-14 82.8 169 34.3
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 1.7e-13 81.3 132 37.1
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 1.7e-13 81.3 125 36.8
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 2.2e-13 80.9 128 41.4
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 1.1e-12 78.6 131 36.6
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 1.4e-12 78.2 157 35.0
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 1.4e-12 78.2 98 41.8
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 2.5e-12 77.4 132 34.8
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 2.5e-12 77.4 158 33.5
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 4.2e-12 76.6 122 34.4
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 4.2e-12 76.6 122 34.4
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 5.5e-12 76.3 115 40.9
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 7.1e-12 75.9 131 35.9
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 2.1e-11 74.3 164 29.9
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 3.5e-11 73.6 126 33.3
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 4.6e-11 73.2 131 35.1
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 7.9e-11 72.4 131 36.6
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 7.9e-11 72.4 132 34.1
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 1.8e-10 71.2 118 32.2
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 1.8e-10 71.2 130 34.6
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 3.0e-10 70.5 132 34.1
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 6.7e-10 69.3 131 29.8
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 6.7e-10 69.3 131 29.8
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 6.7e-10 69.3 181 27.1
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 6.7e-10 69.3 126 31.7
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 8.7e-10 68.9 158 33.5
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 1.1e-09 68.6 175 28.6
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 1.5e-09 68.2 161 31.1
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 1.9e-09 67.8 133 35.3
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 3.3e-09 67.0 125 33.6
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 5.7e-09 66.2 172 27.3
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 9.6e-09 65.5 115 36.5
RcHm_v2.0_Chr2g0161831 Rosa chinensis HOM05D007281 ORTHO05D009241 1.5e-06 58.2 41 63.4


User provided reference genes

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