Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1076900 Malus domestica HOM05D000442 ORTHO05D035879 2.9e-38 161.4 80 100.0
MD09G1087900 Malus domestica HOM05D000442 ORTHO05D001979 1.6e-20 102.4 63 77.8
MD17G1077600 Malus domestica HOM05D000442 ORTHO05D035879 3.6e-20 101.3 55 89.1
Prupe.3G237700 Prunus persica HOM05D000442 ORTHO05D001979 9.7e-18 93.2 63 69.8
Haze_14146 Corylus avellana HOM05D000442 ORTHO05D001979 9.4e-13 76.6 63 61.9
QL02p052287 Quercus lobata HOM05D000442 ORTHO05D001979 2.1e-12 75.5 63 61.9
CiPaw.03G061000 Carya illinoinensis HOM05D000442 ORTHO05D001979 2.7e-12 75.1 63 61.9
Cfa007929 Carpinus fangiana HOM05D000442 ORTHO05D001979 1.0e-11 73.2 63 60.3
RcHm_v2.0_Chr2g0162821 Rosa chinensis HOM05D000442 ORTHO05D001979 6.7e-11 70.5 63 58.7
RcHm_v2.0_Chr2g0162871 Rosa chinensis HOM05D000442 ORTHO05D001979 6.7e-11 70.5 63 58.7
CiPaw.04G041800 Carya illinoinensis HOM05D000442 ORTHO05D001979 3.3e-10 68.2 63 57.1
GSVIVG01031037001 Vitis vinifera HOM05D000442 ORTHO05D001979 3.3e-10 68.2 63 57.1
Atru.chr1.1711_Atru.chr1.1712 Acer truncatum HOM05D000442 ORTHO05D001979 4.4e-10 67.8 63 58.7
FAN02G2631 Fragaria x ananassa HOM05D000442 ORTHO05D001979 1.7e-09 65.9 64 56.2
FAN05G2435 Fragaria x ananassa HOM05D000442 ORTHO05D001979 1.7e-09 65.9 64 56.2
Ciclev10011187m.g Citrus clementina HOM05D000442 ORTHO05D001979 2.2e-09 65.5 63 57.1
FAN14G3616 Fragaria x ananassa HOM05D000442 ORTHO05D001979 2.2e-09 65.5 63 57.1
Actinidia17636 Actinidia chinensis HOM05D000442 ORTHO05D001979 3.7e-09 64.7 63 57.1
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 3.7e-09 64.7 64 54.7
Thecc.04G135100 Theobroma cacao HOM05D000442 ORTHO05D001979 3.7e-09 64.7 64 54.7
FvH4_6g45170 Fragaria vesca HOM05D000442 ORTHO05D001979 6.3e-09 63.9 63 55.6
FAN02G2211 Fragaria x ananassa HOM05D000442 ORTHO05D035879 1.4e-08 62.8 64 56.2
COL.COLO4_09318 Corchorus olitorius HOM05D000442 ORTHO05D001979 1.8e-08 62.4 64 53.1
SHI22420 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-08 61.6 59 55.9
Sabra17G0094700 Salix brachista HOM05D000442 ORTHO05D001979 4.1e-08 61.2 63 55.6
Eucgr.F02490 Eucalyptus grandis HOM05D000442 ORTHO05D001979 5.3e-08 60.8 63 52.4
Potri.017G114400 Populus trichocarpa HOM05D000442 ORTHO05D001979 7.0e-08 60.5 63 54.0
TWI77G0931 Tripterygium wilfordii HOM05D000442 ORTHO05D001979 7.0e-08 60.5 63 49.2
Lj2A443G54 Lonicera japonica HOM05D000442 ORTHO05D001979 3.5e-07 58.2 63 55.6
CSS0043682 Camellia sinensis var. sinensis HOM05D000442 ORTHO05D001979 5.9e-07 57.4 63 50.8
Rhsim08G0082100 Rhododendron simsii HOM05D000442 ORTHO05D001979 7.7e-07 57.0 63 52.4
TAR629G0013 Trochodendron aralioides HOM05D000442 ORTHO05D001979 7.7e-07 57.0 63 50.8
Cc00_g15730 Coffea canephora HOM05D000442 ORTHO05D001979 1.7e-06 55.8 63 47.6
Actinidia26302 Actinidia chinensis HOM05D000442 ORTHO05D001979 2.9e-06 55.1 63 50.8
TAR371G0560 Trochodendron aralioides HOM05D000442 ORTHO05D001979 2.9e-06 55.1 63 47.6
Sabra04G0079700 Salix brachista HOM05D000442 ORTHO05D001979 3.8e-06 54.7 63 50.8
Dinv34828 Davidia involucrata HOM05D000442 ORTHO05D001979 5.0e-06 54.3 63 47.6
vmacro18078 Vaccinium macrocarpon HOM05D000442 ORTHO05D001979 6.5e-06 53.9 63 52.4


User provided reference genes

Program Settings