Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.7e-52 209.1 113 100.0
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 2.5e-43 178.7 113 87.6
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 7.8e-21 104.0 116 60.3
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.0e-20 103.6 61 86.9
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.3e-20 102.4 128 59.4
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.0e-20 102.1 116 59.5
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.9e-20 101.7 116 59.5
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.5e-19 99.0 116 57.8
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 2.8e-18 95.5 125 58.4
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 7.5e-16 87.4 91 63.7
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 8.3e-15 84.0 91 57.1
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.2e-13 80.1 102 52.9
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.5e-13 78.6 95 53.7
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 6.0e-13 77.8 101 55.4
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.0e-12 77.0 101 53.5
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.3e-12 76.6 86 54.7
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.7e-12 76.3 63 60.3
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 3.9e-12 75.1 110 50.0
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 5.0e-12 74.7 93 52.7
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.1e-11 73.6 75 56.0
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.9e-11 72.8 101 50.5
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.9e-11 72.8 101 50.5
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.5e-11 72.4 111 45.0
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 2.5e-11 72.4 63 55.6
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.5e-11 72.4 108 48.1
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 3.3e-11 72.0 60 63.3
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 5.6e-11 71.2 95 46.3
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 7.3e-11 70.9 59 62.7
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 1.2e-10 70.1 86 47.7
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.2e-10 70.1 59 62.7
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 1.6e-10 69.7 107 45.8
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 6.2e-10 67.8 110 46.4
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 6.2e-10 67.8 99 43.4
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 8.1e-10 67.4 99 45.5
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.1e-09 67.0 116 43.1
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.1e-09 67.0 58 60.3
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.1e-09 67.0 73 53.4
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.1e-09 67.0 63 55.6
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.4e-09 66.6 94 52.1
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.8e-09 66.2 82 46.3
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.8e-09 66.2 66 53.0
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.3e-09 65.9 97 44.3
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.1e-09 65.5 71 49.3
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 4.0e-09 65.1 64 56.2
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 5.2e-09 64.7 64 50.0
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 5.2e-09 64.7 66 51.5
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 8.9e-09 63.9 94 47.9
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 8.9e-09 63.9 59 55.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 1.2e-08 63.5 103 42.7
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.5e-08 63.2 104 47.1
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.5e-08 63.2 108 45.4
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.0e-08 62.8 94 45.7
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 2.0e-08 62.8 96 46.9
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 5.8e-08 61.2 93 46.2
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 7.5e-08 60.8 88 51.1
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 9.9e-08 60.5 62 56.5
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.2e-07 59.3 97 43.3
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 2.9e-07 58.9 94 42.6
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 3.7e-07 58.5 113 39.8
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 3.7e-07 58.5 109 42.2
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 3.7e-07 58.5 109 38.5
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 8.3e-07 57.4 119 40.3
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 1.1e-06 57.0 107 37.4
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 1.4e-06 56.6 113 38.1
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 1.4e-06 56.6 113 38.1
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 1.4e-06 56.6 113 38.1
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 1.4e-06 56.6 41 61.0
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 1.4e-06 56.6 90 42.2
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.4e-06 56.6 89 40.4
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.4e-06 56.6 75 45.3
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.9e-06 56.2 96 41.7
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.9e-06 56.2 107 41.1
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 3.2e-06 55.5 71 49.3
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 3.2e-06 55.5 60 53.3
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.2e-06 55.5 107 40.2
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 5.4e-06 54.7 70 41.4
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 5.4e-06 54.7 68 45.6
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 7.1e-06 54.3 106 42.5
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 7.1e-06 54.3 58 50.0
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 9.2e-06 53.9 109 37.6
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 9.2e-06 53.9 109 37.6
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 9.2e-06 53.9 99 35.4
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 9.2e-06 53.9 92 41.3


User provided reference genes

Program Settings