Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 5.6e-80 300.8 146 100.0
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 2.9e-52 208.8 131 81.7
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.9e-49 198.4 141 71.6
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.8e-38 162.9 138 59.4
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.9e-38 161.0 138 58.7
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 9.0e-38 160.6 138 58.7
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.2e-37 160.2 138 58.7
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.9e-36 155.6 138 58.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.7e-32 141.4 138 53.6
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 3.8e-28 128.6 137 50.4
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.5e-27 125.9 138 48.6
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 5.3e-22 108.2 140 41.4
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.0e-21 106.3 137 43.8
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.0e-20 104.0 142 42.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 1.3e-20 103.6 142 41.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.9e-20 102.4 131 44.3
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 7.2e-19 97.8 127 44.1
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.6e-18 96.7 140 42.9
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.4e-17 93.6 131 43.5
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.8e-17 93.2 137 41.6
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.8e-17 93.2 140 40.7
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 3.0e-17 92.4 115 42.6
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 2.6e-16 89.4 141 42.6
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 5.7e-16 88.2 136 39.0
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 1.3e-15 87.0 137 43.1
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 2.2e-15 86.3 141 36.9
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 2.8e-15 85.9 137 38.7
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 8.2e-15 84.3 140 36.4
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 8.2e-15 84.3 143 37.8
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.2e-13 80.5 143 35.0
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 2.6e-13 79.3 136 39.7
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 3.5e-13 79.0 137 39.4
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 5.9e-13 78.2 145 35.9
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 5.9e-13 78.2 141 33.3
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 7.7e-13 77.8 133 36.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 7.7e-13 77.8 143 30.8
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.3e-12 77.0 141 33.3
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 2.2e-12 76.3 143 30.1
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 3.8e-12 75.5 130 33.1
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 6.5e-12 74.7 143 29.4
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 8.5e-12 74.3 135 40.0
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 3.6e-10 68.9 132 39.4
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 4.7e-10 68.6 134 35.8
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 4.7e-10 68.6 132 39.4
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 6.1e-10 68.2 132 32.6
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 8.0e-10 67.8 132 34.1
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.0e-09 67.4 126 35.7
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 3.0e-09 65.9 134 35.8
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 4.0e-09 65.5 134 33.6
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 4.0e-09 65.5 132 31.1
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 5.2e-09 65.1 133 32.3
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 8.8e-09 64.3 130 36.2
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.5e-08 63.5 124 40.3
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.4e-08 62.0 137 33.6
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 4.4e-08 62.0 134 34.3
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 2.2e-07 59.7 133 33.1
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.8e-07 59.3 139 32.4
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.4e-06 57.0 124 36.3
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.8e-06 56.6 136 29.4


User provided reference genes

Program Settings