Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 4.1e-254 880.9 456 100.0
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 8.0e-234 813.5 456 91.0
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 2.1e-197 692.6 464 78.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 2.3e-196 689.1 462 78.6
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.9e-196 688.3 458 77.5
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 5.1e-196 688.0 462 78.8
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.4e-193 679.1 478 76.2
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 5.8e-192 674.5 463 78.6
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.7e-191 672.9 466 76.6
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 3.8e-183 645.2 460 73.0
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.0e-176 622.9 462 68.8
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 2.0e-176 622.9 448 70.5
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 1.3e-175 620.2 461 68.1
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.0e-172 610.5 471 68.6
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 2.5e-171 605.9 449 67.0
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 4.3e-171 605.1 459 66.9
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 1.6e-170 603.2 459 66.7
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 2.1e-170 602.8 392 72.2
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.1e-170 602.8 463 66.7
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 9.0e-169 597.4 393 73.5
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 7.6e-168 594.3 367 78.2
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 6.5e-167 591.3 400 70.8
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 1.9e-166 589.7 465 64.1
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 3.2e-166 589.0 399 72.4
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 9.3e-166 587.4 390 71.3
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.6e-165 586.6 392 72.7
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 3.6e-165 585.5 460 65.2
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.6e-165 585.5 398 69.8
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.9e-165 584.3 392 73.2
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 7.9e-165 584.3 389 71.7
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.3e-164 583.6 436 68.1
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 5.1e-164 581.6 494 61.3
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.1e-163 580.5 458 62.9
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 1.1e-163 580.5 502 60.8
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 5.7e-163 578.2 458 62.7
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 2.2e-162 576.2 463 64.6
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 4.8e-162 575.1 458 66.2
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 2.4e-161 572.8 369 73.2
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 3.1e-161 572.4 454 65.4
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 3.1e-161 572.4 460 64.3
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 6.9e-161 571.2 398 67.8
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 6.9e-161 571.2 468 62.2
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 1.2e-160 570.5 416 66.3
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 2.0e-160 569.7 465 62.8
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 2.0e-160 569.7 472 61.2
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.6e-160 569.3 403 69.7
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.6e-160 569.3 492 60.4
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 3.4e-160 568.9 459 62.1
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 4.5e-160 568.5 451 66.3
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 5.9e-160 568.2 468 61.3
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 1.0e-159 567.4 366 73.0
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 1.7e-159 566.6 442 64.0
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 2.2e-159 566.2 409 67.0
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 3.8e-159 565.5 395 67.1
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 3.8e-159 565.5 395 67.1
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 3.8e-159 565.5 455 63.5
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 3.8e-159 565.5 416 66.6
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 5.0e-159 565.1 468 61.3
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 5.0e-159 565.1 395 67.1
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 6.5e-159 564.7 422 64.9
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 1.1e-158 563.9 467 60.8
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 1.4e-158 563.5 366 72.1
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.9e-158 563.1 403 69.0
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 2.5e-158 562.8 467 61.9
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 2.5e-158 562.8 451 61.9
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.5e-158 562.8 455 64.2
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.2e-158 562.4 445 64.0
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 3.2e-158 562.4 471 61.1
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 5.5e-158 561.6 438 63.7
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 9.4e-158 560.8 457 63.7
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 2.1e-157 559.7 472 61.4
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 2.7e-157 559.3 461 62.5
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 3.6e-157 558.9 371 72.5
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 1.4e-156 557.0 401 66.3
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 1.8e-156 556.6 399 66.2
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 2.3e-156 556.2 399 66.2
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 6.7e-156 554.7 481 60.5
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 1.1e-155 553.9 361 71.7
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 1.1e-155 553.9 401 66.1
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 2.0e-155 553.1 373 69.4
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 2.0e-155 553.1 460 62.8
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 3.3e-155 552.4 538 54.3
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 1.3e-154 550.4 399 65.4
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 1.3e-154 550.4 399 65.4
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.3e-154 550.4 423 71.4
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.1e-153 547.4 470 59.1
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 1.8e-153 546.6 414 63.8
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 5.3e-153 545.0 443 61.4
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 5.3e-153 545.0 483 58.4
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 1.2e-152 543.9 458 62.0
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 2.6e-152 542.7 360 70.0
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 5.9e-152 541.6 333 75.7
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 2.2e-151 539.7 450 60.9
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 3.2e-150 535.8 443 61.6
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 2.7e-149 532.7 410 66.3
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 1.0e-148 530.8 359 67.7
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 3.9e-148 528.9 360 67.5
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 1.1e-145 520.8 434 63.4
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-145 520.4 419 62.3
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 5.3e-145 518.5 442 60.9
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 7.0e-145 518.1 428 60.0
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 7.0e-145 518.1 329 73.9
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 9.1e-145 517.7 575 50.6
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 1.2e-144 517.3 467 57.8
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 7.7e-144 514.6 355 69.0
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 2.9e-143 512.7 424 60.8
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 8.5e-143 511.1 333 72.4
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 3.6e-141 505.8 487 57.7
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 1.0e-140 504.2 429 60.6
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 1.2e-139 500.7 373 65.4
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 9.7e-139 497.7 430 60.2
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 9.7e-139 497.7 430 60.2
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 2.4e-137 493.0 470 59.4
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.1e-133 479.9 368 66.6
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 1.0e-132 477.6 364 60.4
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.3e-132 476.5 368 66.3
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 1.1e-129 467.6 412 57.8
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 1.1e-129 467.6 409 57.2
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 7.7e-128 461.5 438 55.9
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.5e-126 457.2 291 70.8
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 4.2e-126 455.7 382 58.1
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 8.9e-124 448.0 353 59.2
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 2.8e-122 443.0 293 70.6
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.6e-120 437.2 335 69.0
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 2.0e-120 436.8 365 53.4
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 2.8e-117 426.4 369 57.5
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 4.7e-117 425.6 353 59.2
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 8.3e-114 414.8 382 54.7
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 3.3e-110 402.9 399 50.9
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 8.0e-109 398.3 248 74.6
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.0e-105 385.2 249 71.9
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 2.3e-103 380.2 255 71.4
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 1.1e-102 377.9 217 79.3
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 2.7e-96 356.7 206 80.1
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 3.3e-78 296.6 368 40.8
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.3e-74 284.6 288 56.2
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 5.1e-63 246.1 332 41.6
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 5.1e-63 246.1 343 37.3
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 8.8e-47 192.2 176 55.7
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.6e-38 164.1 98 75.5
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 5.7e-38 162.9 206 50.0
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.2e-33 146.7 85 77.6
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 3.6e-24 117.1 77 68.8
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 2.4e-20 104.4 108 50.9
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.2e-18 97.8 62 72.6
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 2.9e-18 97.4 95 52.6
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 8.5e-18 95.9 55 78.2
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 8.5e-18 95.9 55 78.2
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 8.5e-18 95.9 55 78.2
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 2.5e-17 94.4 55 76.4
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 9.4e-17 92.4 54 81.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 1.2e-16 92.0 54 75.9
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 1.8e-15 88.2 93 45.2
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 1.7e-13 81.6 72 62.5
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 9.5e-09 65.9 32 87.5
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 1.0e-07 62.4 59 54.2
Gohir.D02G161780 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.4e-06 57.4 35 68.6
Gohir.D10G176966 Gossypium hirsutum HOM05D004519 ORTHO05D017048 3.4e-06 57.4 35 68.6


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