Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 1.7e-41 172.2 84 100.0
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 5.4e-27 124.0 61 93.4
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 9.2e-27 123.2 61 93.4
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 1.2e-26 122.9 61 91.8
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 91.8
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 1.6e-26 122.5 61 90.2
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 2.0e-26 122.1 61 90.2
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 2.0e-26 122.1 61 90.2
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.0e-26 122.1 61 91.8
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 2.0e-26 122.1 61 88.5
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 2.0e-26 122.1 61 90.2
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 88.5
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 88.5
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 88.5
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 90.2
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 90.2
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 2.7e-26 121.7 61 88.5
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 88.5
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 90.2
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 90.2
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 90.2
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 90.2
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 88.5
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 3.5e-26 121.3 61 88.5
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 4.6e-26 120.9 61 90.2
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 6.0e-26 120.6 61 88.5
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 6.0e-26 120.6 61 88.5
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 6.0e-26 120.6 61 88.5
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 6.0e-26 120.6 61 88.5
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 6.0e-26 120.6 61 88.5
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 7.8e-26 120.2 61 88.5
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 1.0e-25 119.8 61 90.2
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 86.9
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 86.9
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 88.5
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 88.5
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 88.5
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 1.3e-25 119.4 61 88.5
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 1.7e-25 119.0 61 88.5
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 2.3e-25 118.6 61 88.5
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 3.0e-25 118.2 61 86.9
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 3.0e-25 118.2 61 86.9
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 3.0e-25 118.2 61 86.9
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 3.0e-25 118.2 61 86.9
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 5.0e-25 117.5 61 86.9
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.1e-24 116.3 67 83.6
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.1e-24 116.3 61 85.2
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.1e-24 116.3 61 85.2
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.1e-24 116.3 61 85.2
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 1.1e-24 116.3 66 83.3
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 1.5e-24 115.9 61 83.6
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 2.5e-24 115.2 61 83.6
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 7.3e-24 113.6 61 83.6
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 2.8e-23 111.7 61 82.0
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 6.2e-23 110.5 61 83.6
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 8.1e-23 110.2 61 80.3
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 1.1e-22 109.8 61 80.3
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 4.0e-22 107.8 61 78.7
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 8.9e-22 106.7 93 61.3
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 4.4e-21 104.4 96 57.3
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 7.5e-21 103.6 61 78.7
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 3.7e-20 101.3 51 86.3
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.4e-19 99.4 60 76.7
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 1.9e-19 99.0 61 70.5
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 2.7e-18 95.1 47 87.2
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 7.8e-18 93.6 47 87.2
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 3.0e-17 91.7 57 70.2
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 3.9e-17 91.3 61 72.1
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 1.9e-16 89.0 53 73.6
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 4.4e-13 77.8 44 75.0
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 1.4e-11 72.8 40 80.0
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.6e-10 69.3 61 60.7
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 4.3e-08 61.2 39 71.8
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 3.6e-07 58.2 41 68.3


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