Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1258400 Malus domestica HOM05D006247 ORTHO05D007684 9.9e-158 560.1 283 100.0
Prupe.1G086300 Prunus persica HOM05D006247 ORTHO05D007684 3.4e-118 428.7 273 79.1
RcHm_v2.0_Chr4g0402581 Rosa chinensis HOM05D006247 ORTHO05D007684 1.3e-109 400.2 272 73.2
FvH4_4g08310 Fragaria vesca HOM05D006247 ORTHO05D007684 3.0e-106 389.0 272 72.1
FAN22G0611 Fragaria x ananassa HOM05D006247 ORTHO05D007684 6.7e-106 387.9 273 72.2
FAN12G4057 Fragaria x ananassa HOM05D006247 ORTHO05D007684 5.9e-102 374.8 302 65.2
QL02p097643 Quercus lobata HOM05D006247 ORTHO05D007684 2.0e-89 333.2 274 61.3
CiPaw.07G192000 Carya illinoinensis HOM05D006247 ORTHO05D007684 2.6e-89 332.8 274 62.8
CANSAT11G2703 Cannabis sativa HOM05D006247 ORTHO05D007684 1.7e-88 330.1 281 61.2
Glyma.17G063800 Glycine max HOM05D006247 ORTHO05D007684 1.6e-83 313.5 277 56.0
Thecc.09G172600 Theobroma cacao HOM05D006247 ORTHO05D007684 2.8e-83 312.8 268 58.6
Phvul.003G146300 Phaseolus vulgaris HOM05D006247 ORTHO05D007684 4.7e-83 312.0 274 55.8
Manes.14G152800 Manihot esculenta HOM05D006247 ORTHO05D007684 3.7e-80 302.4 274 57.7
MD13G1255300 Malus domestica HOM05D006247 ORTHO05D007684 6.4e-80 301.6 249 67.9
VMungo1215G1070 Vigna mungo HOM05D006247 ORTHO05D007684 2.4e-79 299.7 278 54.3
Dinv42726 Davidia involucrata HOM05D006247 ORTHO05D007684 4.1e-79 298.9 274 59.5
Dinv43375 Davidia involucrata HOM05D006247 ORTHO05D007684 4.1e-79 298.9 274 59.5
Ca_21220_v3 Cicer arietinum L. HOM05D006247 ORTHO05D007684 7.0e-79 298.1 275 54.2
Gorai.004G100200 Gossypium raimondii HOM05D006247 ORTHO05D007684 7.0e-79 298.1 267 56.9
Lalb_Chr12g0199361 Lupinus albus HOM05D006247 ORTHO05D007684 7.0e-79 298.1 277 53.4
CSS0031352 Camellia sinensis var. sinensis HOM05D006247 ORTHO05D007684 9.2e-79 297.7 269 58.0
COL.COLO4_07069 Corchorus olitorius HOM05D006247 ORTHO05D007684 9.2e-79 297.7 297 53.2
TWI34G1331 Tripterygium wilfordii HOM05D006247 ORTHO05D007684 1.6e-78 297.0 277 56.3
Duzib168G0886 Durio zibethinus HOM05D006247 ORTHO05D007684 2.0e-78 296.6 267 56.9
Medtr4g128240 Medicago truncatula HOM05D006247 ORTHO05D007684 2.7e-78 296.2 275 53.8
GSVIVG01029207001 Vitis vinifera HOM05D006247 ORTHO05D007684 7.8e-78 294.7 280 56.4
Potri.006G168900 Populus trichocarpa HOM05D006247 ORTHO05D007684 1.3e-77 293.9 271 58.3
Atru.chr7.645 Acer truncatum HOM05D006247 ORTHO05D007684 2.3e-77 293.1 272 57.4
Gohir.D08G094300 Gossypium hirsutum HOM05D006247 ORTHO05D007684 3.9e-77 292.4 267 55.8
FAN07G1589 Fragaria x ananassa HOM05D006247 ORTHO05D007684 5.0e-77 292.0 250 62.8
Gohir.A08G084700 Gossypium hirsutum HOM05D006247 ORTHO05D007684 1.1e-76 290.8 267 56.2
TPR.G5375 Trifolium pratense HOM05D006247 ORTHO05D007684 2.5e-76 289.7 275 51.6
Ciclev10007836m.g Citrus clementina HOM05D006247 ORTHO05D007684 4.3e-76 288.9 269 56.9
Cc06_g13290 Coffea canephora HOM05D006247 ORTHO05D007684 1.2e-75 287.3 274 54.7
arahy.Tifrunner.gnm1.ann1.B1Q0FL Arachis hypogaea HOM05D006247 ORTHO05D007684 1.6e-75 287.0 277 52.7
Sabra06G0130300 Salix brachista HOM05D006247 ORTHO05D007684 2.8e-75 286.2 271 56.8
Lj4g0017814 Lotus japonicus HOM05D006247 ORTHO05D007684 1.8e-74 283.5 277 52.3
Psat4g012560 Pisum sativum HOM05D006247 ORTHO05D007684 6.8e-74 281.6 275 51.6
TAR383G1025 Trochodendron aralioides HOM05D006247 ORTHO05D007684 1.2e-73 280.8 277 53.4
Actinidia04160 Actinidia chinensis HOM05D006247 ORTHO05D007684 1.1e-71 274.2 270 55.2
vmacro13121 Vaccinium macrocarpon HOM05D006247 ORTHO05D007684 3.2e-71 272.7 270 54.1
Cpa.g.sc95.55 Carica papaya HOM05D006247 ORTHO05D007684 7.0e-71 271.6 273 54.6
Sed0001652 Sechium edule HOM05D006247 ORTHO05D007684 7.0e-71 271.6 273 56.0
MSTRG.10736 Avicennia marina HOM05D006247 ORTHO05D007684 1.0e-69 267.7 269 53.9
ECA234G4502 Erigeron canadensis HOM05D006247 ORTHO05D007684 1.7e-69 266.9 282 52.1
Hund09028 Selenicereus undatus HOM05D006247 ORTHO05D007684 3.9e-69 265.8 272 53.7
Lj9A685T58 Lonicera japonica HOM05D006247 ORTHO05D007684 6.6e-69 265.0 279 52.3
MELO3C004030.2 Cucumis melo HOM05D006247 ORTHO05D007684 8.6e-69 264.6 274 51.1
AUR62033213 Chenopodium quinoa HOM05D006247 ORTHO05D007684 1.5e-68 263.8 275 52.4
Sc18g0007480 Simmondsia chinensis HOM05D006247 ORTHO05D007684 1.9e-68 263.5 270 51.9
Nn2g12713 Nelumbo nucifera HOM05D006247 ORTHO05D007684 2.5e-68 263.1 275 49.5
ClCG11G012190 Citrullus lanatus HOM05D006247 ORTHO05D007684 3.3e-68 262.7 283 51.2
Oeu025222.1 Olea europaea HOM05D006247 ORTHO05D007684 3.3e-68 262.7 274 51.8
HanXRQChr10g0308211 Helianthus annuus HOM05D006247 ORTHO05D007684 4.3e-68 262.3 269 52.4
PSO170G0820 Papaver somniferum HOM05D006247 ORTHO05D007684 5.6e-68 261.9 270 51.1
PGR102G2305 Punica granatum HOM05D006247 ORTHO05D007684 7.3e-68 261.5 267 49.4
PSO017G3786 Papaver somniferum HOM05D006247 ORTHO05D007684 6.2e-67 258.5 270 50.7
Rhsim01G0005000 Rhododendron simsii HOM05D006247 ORTHO05D007684 2.3e-66 256.5 253 53.4
EL10Ac4g10218 Beta vulgaris HOM05D006247 ORTHO05D007684 4.0e-66 255.8 274 51.5
Migut.K00244 Erythranthe guttata HOM05D006247 ORTHO05D007684 5.2e-66 255.4 274 50.4
EL10Ac4g10223 Beta vulgaris HOM05D006247 ORTHO05D007684 6.8e-66 255.0 274 51.5
Rhsim01G0005100 Rhododendron simsii HOM05D006247 ORTHO05D007684 8.9e-66 254.6 277 49.8
CsaV3_2G008340 Cucumis sativus L. HOM05D006247 ORTHO05D007684 1.2e-65 254.2 269 50.9
SalBow1G0102 Salvia bowleyana HOM05D006247 ORTHO05D007684 9.9e-65 251.1 277 49.8
AUR62021296 Chenopodium quinoa HOM05D006247 ORTHO05D007684 2.2e-64 250.0 271 50.9
Sopen02g003860 Solanum pennellii HOM05D006247 ORTHO05D007684 1.9e-63 246.9 272 49.6
Aqoxy7G02323 Aquilegia oxysepala HOM05D006247 ORTHO05D007684 5.4e-63 245.4 270 47.8
FAN17G2058 Fragaria x ananassa HOM05D006247 ORTHO05D007684 7.1e-63 245.0 371 42.3
Solyc02g014520.4 Solanum lycopersicum HOM05D006247 ORTHO05D007684 7.1e-63 245.0 272 49.3
DCAR_014704 Daucus carota HOM05D006247 ORTHO05D007684 9.2e-63 244.6 273 49.1
Eucgr.C02305 Eucalyptus grandis HOM05D006247 ORTHO05D007684 3.9e-61 239.2 222 56.3
Lsat_1_v5_gn_5_84660 Lactuca sativa HOM05D006247 ORTHO05D007684 8.6e-61 238.0 278 48.9
Carub.0003s3308 Capsella rubella HOM05D006247 ORTHO05D007684 1.1e-60 237.7 270 47.8
SGA_v2.0_scaffold12G06066 Striga asiatica HOM05D006247 ORTHO05D007684 1.5e-60 237.3 256 49.2
AT2G18850 Arabidopsis thaliana HOM05D006247 ORTHO05D007684 3.3e-60 236.1 270 47.8
AL3G53100 Arabidopsis lyrata HOM05D006247 ORTHO05D007684 7.3e-60 235.0 270 46.7
THA.LOC104803499 Tarenaya hassleriana HOM05D006247 ORTHO05D007684 1.1e-58 231.1 282 47.2
C07p03920 Brassica napus HOM05D006247 ORTHO05D007684 2.0e-57 226.9 275 46.9
Aa31LG8G15940 Aethionema arabicum HOM05D006247 ORTHO05D007684 2.6e-57 226.5 268 48.9
BolC7t40784H Brassica oleracea HOM05D006247 ORTHO05D007684 2.6e-57 226.5 275 46.5
A07p01840 Brassica napus HOM05D006247 ORTHO05D007684 4.4e-57 225.7 268 47.0
MBI14_g17363_MAGBIO Magnolia biondii HOM05D006247 ORTHO05D007684 4.4e-57 225.7 256 47.3
Sp3g32310 Schrenkiella parvula HOM05D006247 ORTHO05D007684 4.4e-57 225.7 270 46.7
Thhalv10001950m.g Eutrema salsugineum HOM05D006247 ORTHO05D007684 5.8e-57 225.3 268 47.0
BcaB03g16669 Brassica carinata HOM05D006247 ORTHO05D007684 7.6e-57 224.9 268 45.9
BraA07t27984Z Brassica rapa HOM05D006247 ORTHO05D007684 7.6e-57 224.9 268 47.0
EL10Ac8g18280 Beta vulgaris HOM05D006247 ORTHO05D007684 1.1e-55 221.1 299 46.5
BcaC06g36474 Brassica carinata HOM05D006247 ORTHO05D007684 2.4e-55 219.9 268 46.3
AUR62040315 Chenopodium quinoa HOM05D006247 ORTHO05D007684 1.2e-54 217.6 243 49.8
Ah.09g229830 Amaranthus hybridus HOM05D006247 ORTHO05D007684 5.1e-53 212.2 274 46.0
CARHR109410 Cardamine hirsuta HOM05D006247 ORTHO05D007684 5.1e-53 212.2 283 44.9
ATR0580G346 Amborella trichopoda HOM05D006247 ORTHO05D007684 1.1e-52 211.1 274 43.1
SHI12522 Sapria himalayana HOM05D006247 ORTHO05D007684 2.1e-51 206.8 206 53.4
Zm00001eb414720 Zea mays HOM05D006247 ORTHO05D007684 6.2e-51 205.3 262 45.8
Os08g0244400 Oryza sativa ssp. japonica HOM05D006247 ORTHO05D007684 1.3e-48 197.6 267 43.1
CDE05G3038 Ceratophyllum demersum HOM05D006247 ORTHO05D007684 2.2e-48 196.8 198 52.5
HPP92_015229 Vanilla planifolia HOM05D006247 ORTHO05D007684 1.1e-44 184.5 263 40.3
TAR383G0012 Trochodendron aralioides HOM05D006247 ORTHO05D007684 4.6e-38 162.5 141 58.9
Glyma.13G096300 Glycine max HOM05D006247 ORTHO05D007684 7.4e-36 155.2 152 52.6
Mapoly0146s0042 Marchantia polymorpha HOM05D006247 ORTHO05D007684 6.2e-35 152.1 223 38.1
Peaxi162Scf00113g01819 Petunia axillaris HOM05D006247 ORTHO05D007684 7.6e-33 145.2 204 43.1
Nitab4.5_0000018g0090 Nicotiana tabacum HOM05D006247 ORTHO05D007684 1.1e-26 124.8 201 39.3
AagrBONN_evm.TU.Sc2ySwM_117.653 Anthoceros agrestis HOM05D006247 ORTHO05D007684 1.4e-26 124.4 127 50.4
Nitab4.5_0004255g0020 Nicotiana tabacum HOM05D006247 ORTHO05D007684 6.9e-26 122.1 208 39.9
Hma1.2p1_3184F.1_g333730 Hydrangea macrophylla HOM05D006247 ORTHO05D007684 5.0e-08 62.8 55 69.1
SMO172G0104 Selaginella moellendorffii HOM05D006247 ORTHO05D007684 1.1e-07 61.6 173 30.1
CBR_g35035 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-07 61.2 220 25.9
SEGI_27794 Sequoiadendron giganteum HOM05D006247 ORTHO05D007684 7.2e-07 58.9 157 27.4
Aa31LG1G1000 Aethionema arabicum HOM05D005456 ORTHO05D006805 3.6e-06 56.6 127 27.6
RcHm_v2.0_Chr4g0439211 Rosa chinensis HOM05D005456 ORTHO05D006805 4.7e-06 56.2 128 29.7
FAN12G1233 Fragaria x ananassa HOM05D005456 ORTHO05D006805 7.9e-06 55.5 128 29.7
Lalb_Chr05g0220241 Lupinus albus HOM05D005456 ORTHO05D006805 7.9e-06 55.5 128 28.9


User provided reference genes

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