Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 9.1e-60 233.4 121 100.0
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 6.3e-53 210.7 123 91.1
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 7.5e-46 187.2 123 80.5
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 4.5e-43 177.9 123 75.6
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.7e-42 176.0 120 76.7
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 1.1e-41 173.3 120 75.0
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 1.5e-41 172.9 119 76.5
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 2.5e-41 172.2 122 72.1
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.5e-41 172.2 120 74.2
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 7.2e-41 170.6 121 75.2
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 9.5e-41 170.2 120 72.5
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 2.8e-40 168.7 119 69.7
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 1.4e-39 166.4 122 69.7
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 1.8e-39 166.0 123 70.7
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.8e-39 166.0 117 72.6
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 1.8e-39 166.0 123 69.1
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 2.3e-39 165.6 119 70.6
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 6.8e-39 164.1 115 71.3
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 8.8e-39 163.7 123 67.5
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 8.8e-39 163.7 123 69.9
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 8.8e-39 163.7 113 74.3
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.2e-38 163.3 123 68.3
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 2.0e-38 162.5 120 66.7
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 2.0e-38 162.5 123 67.5
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 2.6e-38 162.2 119 68.9
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 2.6e-38 162.2 119 67.2
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 2.6e-38 162.2 116 69.0
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 5.7e-38 161.0 122 67.2
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 7.5e-38 160.6 116 69.0
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 7.5e-38 160.6 122 68.9
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 9.8e-38 160.2 123 66.7
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.7e-37 159.5 123 64.2
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.7e-37 159.5 123 65.0
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 2.2e-37 159.1 116 70.7
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 2.8e-37 158.7 123 66.7
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 2.8e-37 158.7 119 66.4
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 4.9e-37 157.9 123 65.9
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 8.3e-37 157.1 123 67.5
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 8.3e-37 157.1 123 65.9
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 8.3e-37 157.1 117 70.1
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 8.3e-37 157.1 123 67.5
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 1.4e-36 156.4 123 63.4
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 3.1e-36 155.2 115 66.1
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 3.1e-36 155.2 123 62.6
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 7.0e-36 154.1 116 67.2
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 7.0e-36 154.1 122 63.9
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 9.2e-36 153.7 122 65.6
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 9.2e-36 153.7 122 63.9
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 1.2e-35 153.3 123 65.0
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 1.2e-35 153.3 119 64.7
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 2.0e-35 152.5 123 62.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 2.7e-35 152.1 114 64.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 3.5e-35 151.8 111 68.5
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 4.5e-35 151.4 113 65.5
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.0e-34 150.2 114 66.7
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 1.7e-34 149.4 114 64.9
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.7e-34 149.4 114 62.3
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 2.3e-34 149.1 116 63.8
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 2.3e-34 149.1 119 64.7
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 2.9e-34 148.7 119 64.7
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 1.5e-33 146.4 123 62.6
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 2.5e-33 145.6 116 62.1
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 3.3e-33 145.2 114 64.0
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 4.3e-33 144.8 123 61.8
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 5.6e-33 144.4 118 63.6
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 1.2e-32 143.3 123 61.8
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 1.2e-32 143.3 123 59.3
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 1.6e-32 142.9 119 64.7
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 2.8e-32 142.1 123 61.8
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 3.6e-32 141.7 124 61.3
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 3.6e-32 141.7 124 61.3
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 3.6e-32 141.7 114 61.4
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.0e-31 140.2 124 61.3
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.0e-31 140.2 124 61.3
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 1.0e-31 140.2 114 58.8
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 1.4e-31 139.8 114 61.4
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.4e-31 139.8 114 63.2
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 1.8e-31 139.4 123 60.2
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.8e-31 139.4 118 58.5
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.8e-31 139.4 123 59.3
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 4.0e-31 138.3 113 61.1
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 5.2e-31 137.9 123 59.3
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 8.9e-31 137.1 123 60.2
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 8.9e-31 137.1 122 59.8
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.2e-30 136.7 157 53.5
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 4.1e-28 128.3 115 52.2
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.2e-27 126.7 113 55.8
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.6e-27 126.3 111 58.6
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 2.0e-27 125.9 86 75.6
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 2.0e-27 125.9 85 76.5
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 2.0e-27 125.9 115 53.0
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 3.0e-26 122.1 153 48.4
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 2.5e-25 119.0 90 65.6
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 5.6e-25 117.9 85 68.2
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 5.6e-25 117.9 121 51.2
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 8.9e-23 110.5 118 47.5
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 2.9e-21 105.5 86 60.5
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.9e-21 105.5 114 45.6
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 4.9e-21 104.8 114 43.9
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 4.6e-19 98.2 88 61.4
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 1.7e-18 96.3 62 71.0
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 6.2e-16 87.8 105 42.9
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 2.3e-15 85.9 84 47.6
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 2.0e-14 82.8 66 68.2
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.9e-12 76.3 59 59.3
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 6.0e-11 71.2 83 47.0
Medtr1g051110 Medicago truncatula HOM05D001420 ORTHO05D009292 3.4e-06 55.5 72 48.6


User provided reference genes

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