Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD16G1250400 Malus domestica HOM05D006842 ORTHO05D008908 4.2e-103 378.6 289 100.0
MD13G1243700 Malus domestica HOM05D006842 ORTHO05D008908 3.1e-58 229.6 247 53.4
Prupe.1G077100 Prunus persica HOM05D006842 ORTHO05D008908 2.9e-56 223.0 247 52.2
FAN12G0114 Fragaria x ananassa HOM05D006842 ORTHO05D008908 1.3e-48 197.6 246 47.2
FvH4_4g07420 Fragaria vesca HOM05D006842 ORTHO05D008908 1.7e-48 197.2 246 47.2
FAN07G2675 Fragaria x ananassa HOM05D006842 ORTHO05D008908 1.1e-47 194.5 246 47.2
QL12p035267 Quercus lobata HOM05D006842 ORTHO05D008908 5.2e-45 185.7 369 57.5
CSS0012280 Camellia sinensis var. sinensis HOM05D006842 ORTHO05D008908 2.6e-44 183.3 247 42.5
Actinidia01285 Actinidia chinensis HOM05D006842 ORTHO05D008908 1.3e-40 171.0 245 40.0
Haze_22005 Corylus avellana HOM05D006842 ORTHO05D008908 1.1e-39 167.9 241 42.3
RcHm_v2.0_Chr4g0399881 Rosa chinensis HOM05D006842 ORTHO05D008908 2.5e-39 166.8 247 42.5
Cfa013438 Carpinus fangiana HOM05D006842 ORTHO05D008908 5.6e-39 165.6 241 42.3
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 6.1e-38 162.2 241 40.2
Sed0020865 Sechium edule HOM05D006842 ORTHO05D008908 8.9e-37 158.3 241 38.2
TWI34G1525 Tripterygium wilfordii HOM05D006842 ORTHO05D008908 1.2e-36 157.9 247 39.3
Atru.chr8.567 Acer truncatum HOM05D006842 ORTHO05D008908 1.3e-35 154.5 241 38.6
Hma1.2p1_0314F.1_g121750 Hydrangea macrophylla HOM05D006842 ORTHO05D008908 1.3e-35 154.5 245 38.8
Rhsim01G0118900 Rhododendron simsii HOM05D006842 ORTHO05D008908 6.4e-35 152.1 243 38.3
Psat1g144960 Pisum sativum HOM05D006842 ORTHO05D008908 1.4e-34 151.0 362 51.7
vmacro20826 Vaccinium macrocarpon HOM05D006842 ORTHO05D008908 5.4e-34 149.1 242 36.4
Lalb_Chr11g0074851 Lupinus albus HOM05D006842 ORTHO05D008908 1.6e-33 147.5 240 37.9
Nn8g40885 Nelumbo nucifera HOM05D006842 ORTHO05D008908 4.6e-33 146.0 247 36.0
Ca_02053_v3 Cicer arietinum L. HOM05D006842 ORTHO05D008908 1.0e-32 144.8 373 49.3
arahy.Tifrunner.gnm1.ann1.25Z6GM Arachis hypogaea HOM05D006842 ORTHO05D008908 1.7e-32 144.1 367 51.0
arahy.Tifrunner.gnm1.ann1.0YDK6Q Arachis hypogaea HOM05D006842 ORTHO05D008908 2.3e-32 143.7 367 51.0
CiPaw.16G087400 Carya illinoinensis HOM05D006842 ORTHO05D008908 3.0e-32 143.3 245 38.4
ClCG11G011810 Citrullus lanatus HOM05D006842 ORTHO05D008908 3.0e-32 143.3 241 36.1
MSTRG.26539 Avicennia marina HOM05D006842 ORTHO05D008908 6.6e-32 142.1 241 33.6
Ciclev10010743m.g Citrus clementina HOM05D006842 ORTHO05D008908 2.5e-31 140.2 241 36.5
PGR142G3186 Punica granatum HOM05D006842 ORTHO05D008908 3.3e-31 139.8 237 36.7
CANSAT11G0234 Cannabis sativa HOM05D006842 ORTHO05D008908 4.3e-31 139.4 243 35.4
Duzib170G0985 Durio zibethinus HOM05D006842 ORTHO05D008908 4.3e-31 139.4 244 35.2
Medtr2g037740 Medicago truncatula HOM05D006842 ORTHO05D008908 7.3e-31 138.7 239 33.5
Gorai.004G025400 Gossypium raimondii HOM05D006842 ORTHO05D008908 2.1e-30 137.1 244 35.2
Aqoxy7G02761 Aquilegia oxysepala HOM05D006842 ORTHO05D008908 4.7e-30 136.0 241 34.0
CsaV3_2G008680 Cucumis sativus L. HOM05D006842 ORTHO05D008908 1.1e-29 134.8 241 34.4
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 1.4e-29 134.4 244 34.8
Glyma.15G164700 Glycine max HOM05D006842 ORTHO05D008908 2.3e-29 133.7 242 32.6
Gohir.D08G028300 Gossypium hirsutum HOM05D006842 ORTHO05D008908 5.2e-29 132.5 243 34.6
Lj6g0009672 Lotus japonicus HOM05D006842 ORTHO05D008908 6.8e-29 132.1 244 34.8
Gohir.A08G017700 Gossypium hirsutum HOM05D006842 ORTHO05D008908 1.2e-28 131.3 240 34.2
PSO339G1909 Papaver somniferum HOM05D006842 ORTHO05D008908 1.2e-28 131.3 240 34.2
DCAR_020473 Daucus carota HOM05D006842 ORTHO05D008908 2.0e-28 130.6 241 34.0
Phvul.009G237200 Phaseolus vulgaris HOM05D006842 ORTHO05D008908 2.6e-28 130.2 242 32.2
MBI13_g31535_MAGBIO Magnolia biondii HOM05D006842 ORTHO05D008908 3.4e-28 129.8 245 34.7
TPR.G30782 Trifolium pratense HOM05D006842 ORTHO05D008908 5.8e-28 129.0 239 32.6
Sabra18G0117200 Salix brachista HOM05D006842 ORTHO05D008908 7.5e-28 128.6 242 35.1
VMungo1309G0481 Vigna mungo HOM05D006842 ORTHO05D008908 2.2e-27 127.1 240 31.2
Potri.018G143800 Populus trichocarpa HOM05D006842 ORTHO05D008908 1.1e-26 124.8 242 34.7
MELO3C003981.2 Cucumis melo HOM05D006842 ORTHO05D008908 1.9e-26 124.0 241 33.2
Thecc.09G184100 Theobroma cacao HOM05D006842 ORTHO05D008908 3.2e-26 123.2 244 34.0
Oeu018814.3 Olea europaea HOM05D006842 ORTHO05D008908 4.1e-26 122.9 245 31.8
PGSC0003DMG400018607 Solanum tuberosum HOM05D006842 ORTHO05D008908 7.1e-26 122.1 244 31.6
Lj5P661T13 Lonicera japonica HOM05D006842 ORTHO05D008908 9.2e-26 121.7 244 34.8
COL.COLO4_38436 Corchorus olitorius HOM05D006842 ORTHO05D008908 1.6e-25 120.9 230 34.3
Migut.L01888 Erythranthe guttata HOM05D006842 ORTHO05D008908 2.7e-25 120.2 244 32.0
Nitab4.5_0007383g0080 Nicotiana tabacum HOM05D006842 ORTHO05D008908 2.7e-25 120.2 162 40.7
Lsat_1_v5_gn_7_55601 Lactuca sativa HOM05D006842 ORTHO05D008908 2.3e-24 117.1 239 32.2
GSVIVG01012780001 Vitis vinifera HOM05D006842 ORTHO05D008908 3.0e-24 116.7 132 50.0
PSO384G3049 Papaver somniferum HOM05D006842 ORTHO05D008908 1.1e-23 114.8 220 33.2
HanXRQChr03g0068361 Helianthus annuus HOM05D006842 ORTHO05D008908 1.5e-23 114.4 246 31.7
SGA_v2.0_scaffold231G43415 Striga asiatica HOM05D006842 ORTHO05D008908 1.9e-23 114.0 204 76.5
SalBow5G4345 Salvia bowleyana HOM05D006842 ORTHO05D008908 5.6e-23 112.5 219 33.3
Dinv25428 Davidia involucrata HOM05D006842 ORTHO05D008908 2.8e-22 110.2 91 57.1
ECA240G2145 Erigeron canadensis HOM05D006842 ORTHO05D008908 8.1e-22 108.6 135 43.0
Nitab4.5_0005943g0060 Nicotiana tabacum HOM05D006842 ORTHO05D008908 3.1e-21 106.7 244 27.9
Aa31LG3G13140 Aethionema arabicum HOM05D006842 ORTHO05D008908 4.0e-21 106.3 243 30.5
Cc06_g21740 Coffea canephora HOM05D006842 ORTHO05D008908 8.9e-21 105.1 247 29.6
CAN.G272.1 Capsicum annuum HOM05D006842 ORTHO05D008908 1.2e-20 104.8 245 28.6
Sopen05g008190 Solanum pennellii HOM05D006842 ORTHO05D008908 1.2e-20 104.8 245 27.8
Eucgr.D01013 Eucalyptus grandis HOM05D006842 ORTHO05D008908 1.3e-19 101.3 131 42.7
Nitab4.5_0007383g0050 Nicotiana tabacum HOM05D006842 ORTHO05D008908 1.7e-19 100.9 242 27.3
Solyc05g013400.4 Solanum lycopersicum HOM05D006842 ORTHO05D008908 1.7e-19 100.9 247 26.7
Peaxi162Scf00528g00082 Petunia axillaris HOM05D006842 ORTHO05D008908 2.9e-19 100.1 245 28.2
A10p14700 Brassica napus HOM05D006842 ORTHO05D008908 1.1e-18 98.2 238 31.1
BraA10t43553Z Brassica rapa HOM05D006842 ORTHO05D008908 1.1e-18 98.2 238 31.1
CARHR271050 Cardamine hirsuta HOM05D006842 ORTHO05D008908 1.9e-18 97.4 238 31.1
BcaB08g36087 Brassica carinata HOM05D006842 ORTHO05D008908 2.4e-18 97.1 237 30.0
Thhalv10012580m.g Eutrema salsugineum HOM05D006842 ORTHO05D008908 4.1e-18 96.3 233 29.6
THA.LOC104811115 Tarenaya hassleriana HOM05D006842 ORTHO05D008908 5.4e-18 95.9 245 29.4
BolC9t57760H Brassica oleracea HOM05D006842 ORTHO05D008908 7.1e-18 95.5 170 34.1
AT5G57250 Arabidopsis thaliana HOM05D006842 ORTHO05D008908 9.2e-18 95.1 236 30.5
Sp6g18980 Schrenkiella parvula HOM05D006842 ORTHO05D008908 2.7e-17 93.6 234 31.2
HPP92_027423 Vanilla planifolia HOM05D006842 ORTHO05D008908 2.7e-17 93.6 236 26.7
HPP92_021041 Vanilla planifolia HOM05D006842 ORTHO05D008908 4.6e-17 92.8 235 26.8
AL8G33220 Arabidopsis lyrata HOM05D006842 ORTHO05D008908 1.0e-16 91.7 236 30.1
BcaC04g19984 Brassica carinata HOM05D006842 ORTHO05D008908 1.0e-16 91.7 170 33.5
C09p49110 Brassica napus HOM05D006842 ORTHO05D008908 1.0e-16 91.7 170 33.5
Carub.0008s1775 Capsella rubella HOM05D006842 ORTHO05D008908 1.0e-16 91.7 219 29.7
Os01g0263400 Oryza sativa ssp. japonica HOM05D006842 ORTHO05D008908 1.5e-15 87.8 236 27.5
RcHm_v2.0_Chr2g0131261 Rosa chinensis HOM05D006842 ORTHO05D008908 5.6e-15 85.9 57 70.2
Glyma.09G058602 Glycine max HOM05D006842 ORTHO05D008908 7.3e-15 85.5 183 66.7
CDE02G4182 Ceratophyllum demersum HOM05D006842 ORTHO05D008908 5.2e-13 79.3 208 27.4
ATR0626G269 Amborella trichopoda HOM05D006842 ORTHO05D008908 3.8e-11 73.2 69 52.2


User provided reference genes

Program Settings